MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1446c · 46 genes shown · anchor devB · open gene page → · ← back to 1 hop

Evidence: Min score 0
opcA (requalified) — glucose-6-phosphate dehydrogenase assembly protein opcA devB (requalified) — 6-phosphogluconolactonase devB zwf2 (requalified) — glucose-6-phosphate dehydrogenase zwf2 Rv1444c (family_assigned) — hypothetical protein Rv1444c tal (requalified) — transaldolase tal tkt (requalified) — transketolase tkt clgR (family_assigned) — transcriptional regulator ClgR clgR rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv2146c (family_assigned) — YggT family protein Rv2146c rnpA (requalified) — ribonuclease P protein component rnpA ctaB (requalified) — heme o synthase ctaB Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2206 (family_assigned) — DUF3043 domain-containing protein Rv2206 zwf1 (requalified) — glucose-6-phosphate 1-dehydrogenase zwf1 gnd2 (requalified) — decarboxylating 6-phosphogluconate dehydrogenase gnd2 gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 pgi (requalified) — glucose-6-phosphate isomerase pgi fba (requalified) — class II fructose-bisphosphate aldolase fba pfkB (family_assigned) — 1-phosphofructokinase family hexose kinase pfkB tpi (requalified) — triose-phosphate isomerase tpi rpe (requalified) — ribulose-phosphate 3-epimerase rpe glpX (requalified) — class II fructose-bisphosphatase glpX 35kd_ag (family_assigned) — hypothetical protein 35kd_ag sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB pgsA3 (requalified) — CDP-diacylglycerol--glycerol-3-phosphate 3-phospha pgsA3 Rv2743c (family_assigned) — hypothetical protein Rv2743c rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB Rv2147c (requalified) — cell division protein SepF Rv2147c wag31 (requalified) — cell wall synthesis protein Wag31 wag31 ftsZ (requalified) — cell division protein FtsZ ftsZ Rv2148c (family_assigned) — YggS family pyridoxal phosphate-dependent enzyme Rv2148c Rv2256c (dark) — hypothetical protein Rv2256c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c yidD (requalified) — membrane protein insertion efficiency factor YidD yidD yidC (requalified) — membrane protein insertase YidC yidC Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c rpmH (requalified) — 50S ribosomal protein L34 rpmH rpsL (requalified) — 30S ribosomal protein S12 rpsL rplD (requalified) — 50S ribosomal protein L4 rplD ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaE (family_assigned) — heme-copper oxidase subunit III ctaE ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.