MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1433 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
ldtMt3 (requalified) — L%2CD-transpeptidase LdtMt3 ldtMt3 Rv3015c (requalified) — methionine synthase Rv3015c Rv1431 (family_assigned) — DUF3556 domain-containing protein Rv1431 Rv1432 (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1432 Rv2525c (family_assigned) — DUF1906 domain-containing protein Rv2525c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3779 (family_assigned) — DUF6541 family protein Rv3779 lprQ (requalified) — L%2CD-transpeptidase LdtMt5 lprQ Rv3915 (requalified) — peptidoglycan hydrolase Rv3915 ftsQ (requalified) — cell division protein FtsQ ftsQ dacB1 (requalified) — D-alanyl-D-alanine carboxypeptidase DacB1 dacB1 dacB2 (family_assigned) — penicillin-binding protein DacB2 dacB2 Rv1140 (family_assigned) — integral membrane protein Rv1140 lpqA (family_assigned) — sensor domain-containing protein lpqA Rv2172c (requalified) — mycobacterial-type methylenetetrahydrofolate reduc Rv2172c ligA (requalified) — NAD-dependent DNA ligase LigA ligA metK (requalified) — S-adenosylmethionine synthetase metK Rv0192 (family_assigned) — hypothetical protein Rv0192 Rv1429 (family_assigned) — PucR family transcriptional regulator Rv1429 PE16 (family_assigned) — PE family protein PE16 PE16 Rv1428c (family_assigned) — lysophospholipid acyltransferase family protein Rv1428c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv3169 (family_assigned) — hypothetical protein Rv3169 phyA (requalified) — presqualene diphosphate synthase HpnD phyA Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c Rv3668c (requalified) — protease Rv3668c ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD pirG (requalified) — exported repetitive protein pirG Rv1158c (dark) — hypothetical protein Rv1158c Rv3847 (requalified) — peptidase Rv3847 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE bpa (requalified) — proteasome activator protein Bpa bpa rfbD (family_assigned) — ABC transporter permease rfbD glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 Rv3632 (family_assigned) — DUF2304 domain-containing protein Rv3632 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv0481c (family_assigned) — DUF2505 domain-containing protein Rv0481c murB (requalified) — UDP-N-acetylmuramate dehydrogenase murB Rv0480c (family_assigned) — carbon-nitrogen hydrolase family protein Rv0480c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.