MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1430 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE16 (family_assigned) — PE family protein PE16 PE16 Rv1431 (family_assigned) — DUF3556 domain-containing protein Rv1431 Rv1432 (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1432 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1429 (family_assigned) — PucR family transcriptional regulator Rv1429 Rv3005c (family_assigned) — DoxX family protein Rv3005c Rv0024 (family_assigned) — C40 family peptidase Rv0024 Rv1337 (family_assigned) — rhomboid family intramembrane serine protease Rv1337 PE25 (family_assigned) — PE family protein PE25 PE25 PE36 (family_assigned) — PE family protein PE36 PE36 PPE41 (family_assigned) — PPE family protein PPE41 PPE41 Rv1428c (family_assigned) — lysophospholipid acyltransferase family protein Rv1428c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv3169 (family_assigned) — hypothetical protein Rv3169 phyA (requalified) — presqualene diphosphate synthase HpnD phyA ldtMt3 (requalified) — L%2CD-transpeptidase LdtMt3 ldtMt3 Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 fadD12 (requalified) — acyl-CoA ligase FadD12 fadD12 lipO (family_assigned) — alpha/beta hydrolase lipO Rv2113 (family_assigned) — integral membrane protein Rv2113 ptrp (family_assigned) — hypothetical protein ptrp Rv0435c (family_assigned) — AAA family ATPase Rv0435c eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 lppZ (family_assigned) — sorbosone dehydrogenase family protein lppZ ctpH (requalified) — cation-translocating P-type ATPase ctpH Rv0023 (family_assigned) — helix-turn-helix transcriptional regulator Rv0023 Rv0025 (dark) — DUF4226 domain-containing protein Rv0025 whiB5 (family_assigned) — transcriptional regulator WhiB5 whiB5 Rv0026 (dark) — hypothetical protein Rv0026 ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA ripC (requalified) — peptidoglycan hydrolase RipC ripC murI (requalified) — glutamate racemase murI cysM (requalified) — O-phosphoserine sulfhydrylase cysM cysO (requalified) — sulfur carrier protein CysO cysO Rv1332 (family_assigned) — transcriptional regulator Rv1332 mec (requalified) — CysO-cysteine peptidase mec Rv1333 (family_assigned) — P1 family peptidase Rv1333 Rv1794 (family_assigned) — ESX secretion-associated protein EspG Rv1794

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.