MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1429 · 46 genes shown · anchor fadD12 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1429 (family_assigned) — PucR family transcriptional regulator Rv1429 Rv1431 (family_assigned) — DUF3556 domain-containing protein Rv1431 Rv1428c (family_assigned) — lysophospholipid acyltransferase family protein Rv1428c fadD12 (requalified) — acyl-CoA ligase FadD12 fadD12 lipO (family_assigned) — alpha/beta hydrolase lipO Rv2113 (family_assigned) — integral membrane protein Rv2113 ptrp (family_assigned) — hypothetical protein ptrp Rv1432 (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1432 Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 Rv2237 (family_assigned) — hypothetical protein Rv2237 PE16 (family_assigned) — PE family protein PE16 PE16 Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv3169 (family_assigned) — hypothetical protein Rv3169 galE2 (family_assigned) — SDR family oxidoreductase galE2 echA1 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA1 mbtE (requalified) — peptide synthetase mbtE rplF (requalified) — 50S ribosomal protein L6 rplF pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c rpmD (requalified) — 50S ribosomal protein L30 rpmD lepB (requalified) — signal peptidase I lepB Rv2114 (dark) — hypothetical protein Rv2114 Rv1775 (family_assigned) — hypothetical protein Rv1775 Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv3909 (dark) — hypothetical protein Rv3909 phyA (requalified) — presqualene diphosphate synthase HpnD phyA ldtMt3 (requalified) — L%2CD-transpeptidase LdtMt3 ldtMt3 Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c Rv0372c (family_assigned) — XdhC family protein Rv0372c Rv0368c (family_assigned) — VWA domain-containing protein Rv0368c Rv0375c (family_assigned) — carbon monoxyde dehydrogenase medium subunit Rv0375c embR (requalified) — response regulator transcription factor EmbR embR Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv0452 (family_assigned) — TetR family transcriptional regulator Rv0452 Rv1931c (family_assigned) — transcriptional regulator Rv1931c nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.