MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1423 · 46 genes shown · anchor uvrC · open gene page → · ← back to 1 hop

Evidence: Min score 0
whiA (family_assigned) — DNA-binding protein WhiA whiA cuvA (requalified) — carbon utilization/virulence protein CuvA cuvA rapZ (requalified) — RNase adapter RapZ rapZ uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC xerC (requalified) — tyrosine recombinase XerC xerC Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv1417 (family_assigned) — PH domain-containing protein Rv1417 ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 Rv2256c (dark) — hypothetical protein Rv2256c priA (family_assigned) — primosomal protein N' priA fbiA (requalified) — 2-phospho-L-lactate transferase fbiA uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA Rv3242c (family_assigned) — ComF family protein Rv3242c apt (requalified) — adenine phosphoribosyltransferase apt Rv2646 (requalified) — tyrosine-type recombinase/integrase Rv2646 viuB (requalified) — siderophore-interacting protein viuB tyrA (requalified) — prephenate dehydrogenase TyrA tyrA Rv2239c (family_assigned) — hypothetical protein Rv2239c cei (requalified) — envelope integrity protein Cei cei rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB secG (family_assigned) — preprotein translocase subunit SecG secG whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 lprH (family_assigned) — hypothetical protein lprH mihF (requalified) — integration host factor MihF mihF rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribC (requalified) — riboflavin synthase ribC metK (requalified) — S-adenosylmethionine synthetase metK mscL (requalified) — large-conductance mechanosensitive channel protein mscL ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG folE (requalified) — GTP cyclohydrolase I FolE folE moaA1 (requalified) — cyclic pyranopterin monophosphate synthase moaA1 Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2257c (family_assigned) — serine hydrolase domain-containing protein Rv2257c Rv2680 (dark) — DUF3000 domain-containing protein Rv2680

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.