MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1422 · 46 genes shown · anchor whiA · open gene page → · ← back to 1 hop

Evidence: Min score 0
cuvA (requalified) — carbon utilization/virulence protein CuvA cuvA rapZ (requalified) — RNase adapter RapZ rapZ whiA (family_assigned) — DNA-binding protein WhiA whiA uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC Rv1417 (family_assigned) — PH domain-containing protein Rv1417 ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 Rv1419 (requalified) — lectin Rv1419 pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP sufR (family_assigned) — suf operon transcriptional regulator SufR sufR lprH (family_assigned) — hypothetical protein lprH Rv3840 (family_assigned) — transcriptional regulator Rv3840 glmU (requalified) — bifunctional UDP-N-acetylglucosamine diphosphoryla glmU fbiA (requalified) — 2-phospho-L-lactate transferase fbiA xerC (requalified) — tyrosine recombinase XerC xerC Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA mihF (requalified) — integration host factor MihF mihF rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribC (requalified) — riboflavin synthase ribC metK (requalified) — S-adenosylmethionine synthetase metK mscL (requalified) — large-conductance mechanosensitive channel protein mscL ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG folE (requalified) — GTP cyclohydrolase I FolE folE moaA1 (requalified) — cyclic pyranopterin monophosphate synthase moaA1 pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknA (requalified) — serine/threonine protein kinase PknA pknA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA pknD (requalified) — serine/threonine protein kinase PknD pknD sufD (requalified) — Fe-S cluster assembly protein SufD sufD Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 sufC (requalified) — Fe-S cluster assembly ATPase SufC sufC csd (requalified) — cysteine desulfurase csd Rv1466 (requalified) — metal-sulfur cluster assembly factor Rv1466 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1413 (family_assigned) — hypothetical protein Rv1413 Rv1414 (family_assigned) — hypothetical protein Rv1414 cobB (requalified) — NAD-dependent protein deacylase cobB Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.