MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1421 · 46 genes shown · anchor whiA · open gene page → · ← back to 1 hop

Evidence: Min score 0
rapZ (requalified) — RNase adapter RapZ rapZ cuvA (requalified) — carbon utilization/virulence protein CuvA cuvA whiA (family_assigned) — DNA-binding protein WhiA whiA uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC Rv1417 (family_assigned) — PH domain-containing protein Rv1417 fbiA (requalified) — 2-phospho-L-lactate transferase fbiA ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH rne (family_assigned) — Rne/Rng family ribonuclease rne Rv1158c (dark) — hypothetical protein Rv1158c mrsA (requalified) — phosphoglucosamine mutase mrsA Rv1419 (requalified) — lectin Rv1419 Rv3600c (requalified) — type III pantothenate kinase Rv3600c xerC (requalified) — tyrosine recombinase XerC xerC Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA lprH (family_assigned) — hypothetical protein lprH mihF (requalified) — integration host factor MihF mihF rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL fbiB (requalified) — coenzyme F420-0:L-glutamate ligase fbiB cofC (requalified) — 2-phospho-L-lactate guanylyltransferase cofC fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC ddn (requalified) — deazaflavin-dependent nitroreductase Ddn ddn fgd2 (requalified) — F420-dependent hydroxymycolic acid dehydrogenase fgd2 Rv3178 (requalified) — nitroreductase Rv3178 ribC (requalified) — riboflavin synthase ribC ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 folE (requalified) — GTP cyclohydrolase I FolE folE moaA1 (requalified) — cyclic pyranopterin monophosphate synthase moaA1 metK (requalified) — S-adenosylmethionine synthetase metK mscL (requalified) — large-conductance mechanosensitive channel protein mscL gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI eno (requalified) — phosphopyruvate hydratase eno phoH2 (family_assigned) — PhoH family protein phoH2 rphA (requalified) — ribonuclease PH rphA rplU (requalified) — 50S ribosomal protein L21 rplU Rv1157c (dark) — hypothetical protein Rv1157c pimE (requalified) — mannosyltransferase pimE pirG (requalified) — exported repetitive protein pirG ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD glmU (requalified) — bifunctional UDP-N-acetylglucosamine diphosphoryla glmU glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.