MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1420 · 46 genes shown · anchor uvrB · open gene page → · ← back to 1 hop

Evidence: Min score 0
uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB rapZ (requalified) — RNase adapter RapZ rapZ cuvA (requalified) — carbon utilization/virulence protein CuvA cuvA whiA (family_assigned) — DNA-binding protein WhiA whiA uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH Rv1417 (family_assigned) — PH domain-containing protein Rv1417 Rv1419 (requalified) — lectin Rv1419 Rv2191 (family_assigned) — hypothetical protein Rv2191 Rv1711 (requalified) — pseudouridine synthase Rv1711 priA (family_assigned) — primosomal protein N' priA Rv1634 (requalified) — MFS transporter Rv1634 uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 fbiA (requalified) — 2-phospho-L-lactate transferase fbiA xerC (requalified) — tyrosine recombinase XerC xerC Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA mfd (requalified) — transcription-repair coupling factor mfd Rv1637c (family_assigned) — hypothetical protein Rv1637c ribC (requalified) — riboflavin synthase ribC ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 folE (requalified) — GTP cyclohydrolase I FolE folE moaA1 (requalified) — cyclic pyranopterin monophosphate synthase moaA1 metK (requalified) — S-adenosylmethionine synthetase metK mscL (requalified) — large-conductance mechanosensitive channel protein mscL lprH (family_assigned) — hypothetical protein lprH mihF (requalified) — integration host factor MihF mihF rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c cmk (requalified) — (d)CMP kinase cmk engA (requalified) — ribosome biogenesis GTPase Der engA scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA Rv1708 (requalified) — initiation inhibitor protein Rv1708 xthA (requalified) — exodeoxyribonuclease III protein XthA xthA ssb (family_assigned) — single-stranded DNA-binding protein ssb Rv1401 (family_assigned) — membrane protein Rv1401

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.