MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1409 · 46 genes shown · anchor ribA1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribC (requalified) — riboflavin synthase ribC ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH Rv1722 (requalified) — biotin carboxylase Rv1722 rpe (requalified) — ribulose-phosphate 3-epimerase rpe fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu fmt (requalified) — methionyl-tRNA formyltransferase fmt gltB (family_assigned) — glutamate synthase large subunit gltB Rv2047c (family_assigned) — sugar epimerase family protein Rv2047c Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c Rv2840c (family_assigned) — hypothetical protein Rv2840c Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 Rv1939 (family_assigned) — flavin reductase family protein Rv1939 ephB (requalified) — epoxide hydrolase EphB ephB folE (requalified) — GTP cyclohydrolase I FolE folE moaA1 (requalified) — cyclic pyranopterin monophosphate synthase moaA1 ribF (requalified) — bifunctional riboflavin kinase /FMN adenylyltransf ribF Rv1410c (requalified) — aminoglycoside/tetracycline transporter Rv1410c metK (requalified) — S-adenosylmethionine synthetase metK mscL (requalified) — large-conductance mechanosensitive channel protein mscL accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 Rv1723 (requalified) — serine hydrolase Rv1723 birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA Rv2531c (requalified) — amino acid decarboxylase Rv2531c fas (requalified) — fatty acid synthase fas tkt (requalified) — transketolase tkt gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 rpiB (requalified) — ribose-5-phosphate isomerase B rpiB xylB (requalified) — FGGY-family carbohydrate kinase xylB gnd2 (requalified) — decarboxylating 6-phosphogluconate dehydrogenase gnd2 Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP rplJ (requalified) — 50S ribosomal protein L10 rplJ rpsJ (requalified) — 30S ribosomal protein S10 rpsJ ligA (requalified) — NAD-dependent DNA ligase LigA ligA folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD dfrA (requalified) — dihydrofolate reductase dfrA gcvT (requalified) — aminomethyltransferase gcvT metH (requalified) — methionine synthase metH purN (requalified) — phosphoribosylglycinamide formyltransferase purN gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.