MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1405c · 46 genes shown · anchor fmt · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1405c (requalified) — virulence-associated methyltransferase Rv1405c fmt (requalified) — methionyl-tRNA formyltransferase fmt Rv0575c (requalified) — FAD-binding domain Rv0575c fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu Rv1403c (requalified) — class I SAM-dependent methyltransferase Rv1403c rpe (requalified) — ribulose-phosphate 3-epimerase rpe ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG Rv2952 (requalified) — phthiotriol/phenolphthiotriol dimycocerosates meth Rv2952 Rv0839 (family_assigned) — methyltransferase domain-containing protein Rv0839 Rv1404 (family_assigned) — MarR family transcriptional regulator Rv1404 Rv2887 (family_assigned) — MarR family transcriptional regulator Rv2887 Rv0880 (family_assigned) — MarR family transcriptional regulator Rv0880 Rv0193c (family_assigned) — hypothetical protein Rv0193c folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD dfrA (requalified) — dihydrofolate reductase dfrA gcvT (requalified) — aminomethyltransferase gcvT metH (requalified) — methionine synthase metH purN (requalified) — phosphoribosylglycinamide formyltransferase purN erg3 (requalified) — membrane-bound C-5 sterol desaturase erg3 Rv0576 (family_assigned) — TIGR03086 family metal-binding protein Rv0576 pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 TB27.3 (family_assigned) — VOC family protein TB27.3 Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP rplJ (requalified) — 50S ribosomal protein L10 rplJ rpsJ (requalified) — 30S ribosomal protein S10 rpsJ ligA (requalified) — NAD-dependent DNA ligase LigA ligA Rv0759c (family_assigned) — hypothetical protein Rv0759c Rv1726 (requalified) — FAD-binding oxidoreductase Rv1726 tkt (requalified) — transketolase tkt gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 rpiB (requalified) — ribose-5-phosphate isomerase B rpiB xylB (requalified) — FGGY-family carbohydrate kinase xylB gnd2 (requalified) — decarboxylating 6-phosphogluconate dehydrogenase gnd2 ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribC (requalified) — riboflavin synthase ribC ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH Rv1722 (requalified) — biotin carboxylase Rv1722 Rv2953 (requalified) — trans-acting enoyl reductase Rv2953 Rv2951c (requalified) — phthiodiolone/phenolphthiodiolone dimycocerosates Rv2951c Rv0329c (requalified) — class I SAM-dependent methyltransferase Rv0329c Rv2067c (requalified) — class I SAM-dependent methyltransferase Rv2067c cydD (family_assigned) — cytochrome biosyntheisis ABC transporter ATP-bindi cydD lpqR (family_assigned) — M15 family metallopeptidase lpqR gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.