MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1403c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1403c (requalified) — class I SAM-dependent methyltransferase Rv1403c Rv1405c (requalified) — virulence-associated methyltransferase Rv1405c Rv0575c (requalified) — FAD-binding domain Rv0575c Rv1404 (family_assigned) — MarR family transcriptional regulator Rv1404 Rv0759c (family_assigned) — hypothetical protein Rv0759c fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu Rv1726 (requalified) — FAD-binding oxidoreductase Rv1726 Rv0195 (requalified) — response regulator transcription factor Rv0195 darT (requalified) — toxin-antitoxin system toxin DarT darT hisC2 (requalified) — histidinol-phosphate transaminase hisC2 Rv0194 (family_assigned) — ABC transporter ATP-binding protein Rv0194 Rv0193c (family_assigned) — hypothetical protein Rv0193c hsr1 (requalified) — hypothetical protein hsr1 fmt (requalified) — methionyl-tRNA formyltransferase fmt rpe (requalified) — ribulose-phosphate 3-epimerase rpe ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG erg3 (requalified) — membrane-bound C-5 sterol desaturase erg3 Rv0576 (family_assigned) — TIGR03086 family metal-binding protein Rv0576 pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 TB27.3 (family_assigned) — VOC family protein TB27.3 Rv1619 (requalified) — bifunctional lysylphosphatidylglycerol flippase/sy Rv1619 Rv2060 (family_assigned) — integral membrane protein Rv2060 mmpR5 (family_assigned) — siderophore transport transcriptional regulator Mm mmpR5 Rv1684 (family_assigned) — Trm112 family protein Rv1684 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rhlE (requalified) — DEAD/DEAH box helicase rhlE Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP rplJ (requalified) — 50S ribosomal protein L10 rplJ rpsJ (requalified) — 30S ribosomal protein S10 rpsJ ligA (requalified) — NAD-dependent DNA ligase LigA ligA Rv1727 (family_assigned) — TIGR03086 family metal-binding protein Rv1727 Rv3177 (family_assigned) — alpha/beta hydrolase Rv3177 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c cut1 (requalified) — cutinase cut1 plsB1 (requalified) — lysophospholipid acyltransferase plsB1 Rv0845 (requalified) — sensor histidine kinase NarS Rv0845 narL (requalified) — two-component system response regulator NarL narL devR (requalified) — two-component system response regulator DevR devR dosT (requalified) — two-component system sensor histidine kinase DosT dosT darG (requalified) — toxin-antitoxin system antitoxin DNA ADP-ribosyl g darG dnaB (requalified) — replicative DNA helicase dnaB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.