MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1397c · 44 genes shown · anchor vapB10 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC10 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC10 vapB10 (family_assigned) — CopG family transcriptional regulator vapB10 nlhH (family_assigned) — alpha/beta hydrolase nlhH lipI (family_assigned) — alpha/beta hydrolase lipI Rv0611c (family_assigned) — DUF4926 domain-containing protein Rv0611c vapC20 (requalified) — type II toxin-antitoxin system toxin 23S rRNA-spec vapC20 PE_PGRS25 (family_assigned) — PE-PGRS family protein PE_PGRS25 PE_PGRS25 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 mazF7 (requalified) — mRNA interferase MazF7 mazF7 vapB41 (requalified) — antitoxin VapB41 vapB41 vapB14 (requalified) — antitoxin vapB14 carD (requalified) — RNA polymerase-binding transcription factor CarD carD rpmJ (requalified) — 50S ribosomal protein L36 rpmJ priA (family_assigned) — primosomal protein N' priA Rv1401 (family_assigned) — membrane protein Rv1401 Rv1393c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1393c mbtJ (requalified) — acetyl hydrolase mbtJ lipY (requalified) — triacylglycerol lipase Lip lipY Rv0610c (family_assigned) — hypothetical protein Rv0610c Rv0612 (family_assigned) — hypothetical protein Rv0612 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 vapB20 (requalified) — type II toxin-antitoxin system antitoxin VapB20 vapB20 vapB26 (requalified) — type II toxin-antitoxin system antitoxin VapB26 vapB26 Rv2548A (dark) — hypothetical protein Rv2548A vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 Rv1146 (requalified) — transmembrane transport protein Rv1146 ripC (requalified) — peptidoglycan hydrolase RipC ripC vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 Rv0278c (family_assigned) — PE-PGRS family protein PE_PGRS3 Rv0278c vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapC2 (family_assigned) — PIN domain nuclease vapC2 Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 vapC15 (family_assigned) — PIN domain nuclease vapC15 mazE7 (requalified) — antitoxin MazE7 mazE7

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.