MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1387 · 40 genes shown · anchor PE15 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE20 (family_assigned) — PPE family protein PPE20 PPE20 PE15 (family_assigned) — PE family protein PE15 PE15 pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR pyrF (requalified) — orotidine-5'-phosphate decarboxylase pyrF pyrC (requalified) — dihydroorotase pyrC pyrB (family_assigned) — aspartate carbamoyltransferase catalytic subunit pyrB Rv1382 (requalified) — transporter Rv1382 carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA mihF (requalified) — integration host factor MihF mihF PE5 (family_assigned) — PE family protein PE5 PE5 pks9 (requalified) — type I polyketide synthase pks9 alkB (requalified) — alkane 1-monooxygenase alkB pyrE (requalified) — orotate phosphoribosyltransferase pyrE pyrD (requalified) — quinone-dependent dihydroorotate dehydrogenase pyrD argG (requalified) — argininosuccinate synthase argG rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsH (requalified) — 30S ribosomal protein S8 rpsH rpsG (requalified) — 30S ribosomal protein S7 rpsG eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 esxG (requalified) — type VII secretion system protein EsxG esxG espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 pks17 (requalified) — polyketide synthase pks17 pks7 (requalified) — type I polyketide synthase pks7 pks8 (requalified) — polyketide synthase pks8 fadB5 (family_assigned) — medium chain dehydrogenase/reductase family protei fadB5 Rv3777 (requalified) — oxidoreductase Rv3777 mbtE (requalified) — peptide synthetase mbtE rubA (requalified) — rubredoxin rubA Rv3249c (family_assigned) — TetR family transcriptional regulator Rv3249c rubB (requalified) — rubredoxin RubB rubB adhB (requalified) — alcohol dehydrogenase B adhB adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 aldA (requalified) — aldehyde dehydrogenase aldA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.