MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1375 · 46 genes shown · anchor csm5 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1375 (family_assigned) — YcaO-like family protein Rv1375 Rv1376 (family_assigned) — TfuA-like protein Rv1376 Rv1863c (family_assigned) — integral membrane protein Rv1863c Rv1140 (family_assigned) — integral membrane protein Rv1140 Rv0658c (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0658c Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 fbiB (requalified) — coenzyme F420-0:L-glutamate ligase fbiB tyzC (requalified) — hypothetical protein tyzC Rv3127 (requalified) — NAD(P)H nitroreductase Rv3127 Rv3131 (requalified) — NAD(P)H nitroreductase Rv3131 Rv3368c (family_assigned) — nitroreductase family protein Rv3368c acg (family_assigned) — FMN-binding protein Acg acg PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 Rv1864c (family_assigned) — hypothetical protein Rv1864c Rv1865c (family_assigned) — SDR family oxidoreductase Rv1865c Rv1069c (family_assigned) — alpha/beta-hydrolase family protein Rv1069c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 pimE (requalified) — mannosyltransferase pimE Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c Rv1765c (family_assigned) — hypothetical protein Rv1765c Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 Rv1586c (family_assigned) — recombinase family protein Rv1586c eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c vapB6 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB6 rsmA (requalified) — anti-sigma-M factor RsmA rsmA purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL Rv2633c (requalified) — non-heme di-iron catalase Rv2633c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv3896c (requalified) — transglycosylase Rv3896c Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknF (requalified) — serine/threonine protein kinase PknF pknF Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv1277 (family_assigned) — hypothetical protein Rv1277 fbiA (requalified) — 2-phospho-L-lactate transferase fbiA cofC (requalified) — 2-phospho-L-lactate guanylyltransferase cofC Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.