MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1372 · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1372 (family_assigned) — alpha-pyrone synthesis polyketide synthase-like pr Rv1372 Rv1371 (family_assigned) — cytochrome b5 domain-containing protein Rv1371 Rv1139c (family_assigned) — isoprenylcysteine carboxyl methyltransferase famil Rv1139c narK3 (requalified) — nitrate/nitrite transporter narK3 Rv1373 (requalified) — glycolipid sulfotransferase Rv1373 rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA atpE (family_assigned) — F0F1 ATP synthase subunit C atpE Rv0259c (family_assigned) — sirohydrochlorin chelatase Rv0259c Rv1138c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1138c Rv2267c (requalified) — sulfotransferase Rv2267c Rv3529c (requalified) — TLR2-mediated response inhibitor Rv3529c Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 lprF (requalified) — lipoprotein LprF lprF dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 pks10 (requalified) — type III polyketide synthase pks10 pks11 (requalified) — type III polyketide synthase pks11 Rv1137c (dark) — Hypothetical protein Rv1137c Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 narH (family_assigned) — nitrate reductase subunit beta narH narG (family_assigned) — nitrate reductase subunit alpha narG narX (family_assigned) — respiratory nitrate reductase subunit gamma narX narI (family_assigned) — respiratory nitrate reductase subunit gamma narI nirB (family_assigned) — nitrite reductase large subunit NirB nirB narK2 (requalified) — nitrate transporter NarK narK2 PPE39 (family_assigned) — PPE family protein PPE39 PPE39 PPE62 (family_assigned) — PPE family protein PPE62 PPE62 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA helZ (requalified) — DEAD/DEAH box helicase helZ rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH atpB (family_assigned) — F0F1 ATP synthase subunit A atpB atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA Rv0260c (requalified) — uroporphyrinogen-III synthase Rv0260c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.