MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1340 · 46 genes shown · anchor rdgB · open gene page → · ← back to 1 hop

Evidence: Min score 0
rphA (requalified) — ribonuclease PH rphA rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB Rv2681 (requalified) — ribonuclease D Rv2681 rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv1339 (family_assigned) — hypothetical protein Rv1339 rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsK (requalified) — 30S ribosomal protein S11 rpsK cysM (requalified) — O-phosphoserine sulfhydrylase cysM dnaG (requalified) — DNA primase dnaG cysO (requalified) — sulfur carrier protein CysO cysO rpsE (requalified) — 30S ribosomal protein S5 rpsE mec (requalified) — CysO-cysteine peptidase mec Rv1333 (family_assigned) — P1 family peptidase Rv1333 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA murI (requalified) — glutamate racemase murI ndkA (requalified) — nucleoside-diphosphate kinase ndkA guaB2 (requalified) — IMP dehydrogenase guaB2 guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 rplD (requalified) — 50S ribosomal protein L4 rplD rpsH (requalified) — 30S ribosomal protein S8 rpsH rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsM (requalified) — 30S ribosomal protein S13 rpsM rplC (requalified) — 50S ribosomal protein L3 rplC rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC rplM (requalified) — 50S ribosomal protein L13 rplM rplF (requalified) — 50S ribosomal protein L6 rplF rplQ (requalified) — 50S ribosomal protein L17 rplQ rpsC (requalified) — 30S ribosomal protein S3 rpsC rplU (requalified) — 50S ribosomal protein L21 rplU Rv1337 (family_assigned) — rhomboid family intramembrane serine protease Rv1337 Rv1332 (family_assigned) — transcriptional regulator Rv1332 dnaB (requalified) — replicative DNA helicase dnaB dgt (requalified) — deoxyguanosinetriphosphate triphosphohydrolase dgt engA (requalified) — ribosome biogenesis GTPase Der engA sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB moeB1 (requalified) — adenylyltransferase/sulfurtransferase MoeZ moeB1 thiG (requalified) — thiazole synthase thiG moeB2 (requalified) — molybdenum cofactor biosynthesis protein MoeB moeB2 moaE1 (family_assigned) — molybdopterin synthase catalytic subunit 1 moaE1 mpa (requalified) — proteasome ATPase mpa glpK (requalified) — glycerol kinase GlpK glpK

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.