MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1316c · 46 genes shown · anchor alkA · open gene page → · ← back to 1 hop

Evidence: Min score 0
ogt (requalified) — methylated-DNA--protein-cysteine methyltransferase ogt alkA (family_assigned) — bifunctional regulatory protein/DNA repair enzyme alkA Rv1318c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1318c tagA (requalified) — DNA-3-methyladenine glycosylase I tagA Rv1321 (requalified) — endonuclease NucS Rv1321 Rv1322 (family_assigned) — hypothetical protein Rv1322 Rv1319c (requalified) — adenylate cyclase Rv1319c pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv1320c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1320c sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB TB31.7 (requalified) — universal stress protein TB31.7 TB31.7 TB15.3 (requalified) — universal stress protein TB15.3 xthA (requalified) — exodeoxyribonuclease III protein XthA xthA Rv3394c (family_assigned) — DNA polymerase Y family protein Rv3394c ndkA (requalified) — nucleoside-diphosphate kinase ndkA pykA (requalified) — pyruvate kinase pykA cpdA (requalified) — 3'%2C5'-cyclic adenosine monophosphate phosphodies cpdA relA (family_assigned) — RelA/SpoT family protein relA moaA2 (requalified) — GTP 3'%2C8-cyclase MoaA moaA2 moaA1 (requalified) — cyclic pyranopterin monophosphate synthase moaA1 Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 folP2 (requalified) — dihydropteroate synthase folP2 gpgS (requalified) — glucosyl-3-phosphoglycerate synthase gpgS Rv1211 (family_assigned) — hypothetical protein Rv1211 fadD6 (requalified) — long-chain-acyl-CoA synthetase FadD6 fadD6 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv3909 (dark) — hypothetical protein Rv3909 pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpsB (requalified) — 30S ribosomal protein S2 rpsB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR acg (family_assigned) — FMN-binding protein Acg acg Rv3134c (requalified) — universal stress protein Rv3134c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.