MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1312 · 41 genes shown · anchor atpC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1312 (family_assigned) — DUF2550 domain-containing protein Rv1312 atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpE (family_assigned) — F0F1 ATP synthase subunit C atpE Rv3268 (family_assigned) — hypothetical protein Rv3268 atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH lpqB (requalified) — MtrAB system accessory lipoprotein LpqB lpqB Rv2712c (dark) — DUF4192 domain-containing protein Rv2712c atpF (family_assigned) — F0F1 ATP synthase subunit B atpF Rv2342 (family_assigned) — hypothetical protein Rv2342 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ atpB (family_assigned) — F0F1 ATP synthase subunit A atpB lcp1 (requalified) — phosphotransferase Lcp1 lcp1 rplF (requalified) — 50S ribosomal protein L6 rplF pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mtrB (requalified) — two-component system sensor histidine kinase MtrB mtrB mtrA (requalified) — two-component system response regulator MtrA mtrA Rv3243c (family_assigned) — LmeA family phospholipid-binding protein Rv3243c Rv3802c (requalified) — phospholipase Rv3802c lprC (family_assigned) — DUF3558 domain-containing protein lprC Rv3668c (requalified) — protease Rv3668c sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA Rv1486c (family_assigned) — hypothetical protein Rv1486c Rv1109c (requalified) — lipid droplet-associated protein Rv1109c rseA (requalified) — anti-sigma E factor RseA rseA lmeA (requalified) — mannan chain length control protein LmeA lmeA aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv1780 (family_assigned) — hypothetical protein Rv1780 Rv1476 (family_assigned) — DUF6676 family protein Rv1476 Rv3850 (family_assigned) — DUF6474 family protein Rv3850 aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB fhaA (requalified) — cell division-associated protein FhaA fhaA Rv3909 (dark) — hypothetical protein Rv3909 mutT4 (requalified) — NUDIX hydrolase mutT4 Rv3906c (requalified) — pullulanase Rv3906c rsmA (requalified) — anti-sigma-M factor RsmA rsmA sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.