MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1302 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
rfe (requalified) — UDP-N-acetylglucosamine--decaprenyl-phosphate N-ac rfe wbbL1 (requalified) — N-acetylglucosaminyl-diphospho-decaprenol L-rhamno wbbL1 Rv1301 (requalified) — L-threonylcarbamoyladenylate synthase Rv1301 atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH hemK (requalified) — peptide chain release factor N(5)-glutamine methyl hemK prfA (requalified) — peptide chain release factor 1 prfA rpmE (requalified) — 50S ribosomal protein L31 rpmE murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF atpF (family_assigned) — F0F1 ATP synthase subunit B atpF rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA glmU (requalified) — bifunctional UDP-N-acetylglucosamine diphosphoryla glmU rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB lcp1 (requalified) — phosphotransferase Lcp1 lcp1 rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC rho (requalified) — transcription termination factor Rho rho atpB (family_assigned) — F0F1 ATP synthase subunit A atpB atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpE (family_assigned) — F0F1 ATP synthase subunit C atpE Rv2629 (family_assigned) — hypothetical protein Rv2629 rplM (requalified) — 50S ribosomal protein L13 rplM rplT (requalified) — 50S ribosomal protein L20 rplT rpmA (requalified) — 50S ribosomal protein L27 rpmA rpsG (requalified) — 30S ribosomal protein S7 rpsG rplW (requalified) — 50S ribosomal protein L23 rplW rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX ftsQ (requalified) — cell division protein FtsQ ftsQ ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA ftsW (family_assigned) — putative lipid II flippase FtsW ftsW pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknA (requalified) — serine/threonine protein kinase PknA pknA pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.