MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1301 · 44 genes shown · anchor hemK · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1301 (requalified) — L-threonylcarbamoyladenylate synthase Rv1301 hemK (requalified) — peptide chain release factor N(5)-glutamine methyl hemK prfA (requalified) — peptide chain release factor 1 prfA rfe (requalified) — UDP-N-acetylglucosamine--decaprenyl-phosphate N-ac rfe rpmE (requalified) — 50S ribosomal protein L31 rpmE rho (requalified) — transcription termination factor Rho rho atpB (family_assigned) — F0F1 ATP synthase subunit A atpB Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC tsaE (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaE Rv2629 (family_assigned) — hypothetical protein Rv2629 rplM (requalified) — 50S ribosomal protein L13 rplM rplT (requalified) — 50S ribosomal protein L20 rplT rpmA (requalified) — 50S ribosomal protein L27 rpmA rpsG (requalified) — 30S ribosomal protein S7 rpsG wbbL1 (requalified) — N-acetylglucosaminyl-diphospho-decaprenol L-rhamno wbbL1 rplW (requalified) — 50S ribosomal protein L23 rplW rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI yidC (requalified) — membrane protein insertase YidC yidC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpF (family_assigned) — F0F1 ATP synthase subunit B atpF rpfB (requalified) — resuscitation-promoting factor RpfB rpfB ispE (requalified) — 4-diphosphocytidyl-2C-methyl-D-erythritol kinase ispE rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsJ (requalified) — 30S ribosomal protein S10 rpsJ tsaB (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaB alr (requalified) — alanine racemase alr gcp (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera gcp rimI (requalified) — ribosomal protein S18-alanine N-acetyltransferase rimI Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c gadB (requalified) — glutamate decarboxylase gadB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.