MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1293 · 46 genes shown · anchor dapF · open gene page → · ← back to 1 hop

Evidence: Min score 0
lysA (requalified) — diaminopimelate decarboxylase lysA dapF (requalified) — diaminopimelate epimerase dapF thrA (requalified) — homoserine dehydrogenase thrA murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE argS (requalified) — arginine--tRNA ligase argS thrC (requalified) — threonine synthase thrC dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB thrB (requalified) — homoserine kinase thrB dapA (requalified) — 4-hydroxy-tetrahydrodipicolinate synthase dapA dapC (requalified) — succinyldiaminopimelate transaminase dapC glpK (requalified) — glycerol kinase GlpK glpK mpa (requalified) — proteasome ATPase mpa mec (requalified) — CysO-cysteine peptidase mec dapE (requalified) — succinyl-diaminopimelate desuccinylase DapE dapE miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA Rv2728c (family_assigned) — hypothetical protein Rv2728c hflX (family_assigned) — GTP-binding protein HflX hflX asd (requalified) — aspartate-semialdehyde dehydrogenase asd metA (requalified) — homoserine O-acetyltransferase metA murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC ftsW (family_assigned) — putative lipid II flippase FtsW ftsW guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA gltS (requalified) — glutamate--tRNA ligase gltS ileS (requalified) — isoleucine--tRNA ligase ileS metS (requalified) — methionine--tRNA ligase metS proS (requalified) — proline--tRNA ligase proS leuS (requalified) — leucine--tRNA ligase leuS ilvA (requalified) — threonine ammonia-lyase ilvA serC (requalified) — phosphoserine transaminase serC dapD (requalified) — 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxyla dapD Rv2772c (family_assigned) — hypothetical protein Rv2772c Rv2771c (family_assigned) — flavodoxin family protein Rv2771c pcnA (requalified) — poly(A) polymerase PcnA pcnA purM (requalified) — phosphoribosylformylglycinamidine cyclo-ligase purM sdaA (requalified) — L-serine ammonia-lyase sdaA ilvE (requalified) — branched-chain amino acid aminotransferase ilvE metH (requalified) — methionine synthase metH rnj (requalified) — ribonuclease J rnj thyX (requalified) — FAD-dependent thymidylate synthase thyX fdxC (family_assigned) — ferredoxin family protein fdxC hemD (requalified) — uroporphyrin-III C-methyltransferase hemD Rv1176c (family_assigned) — PadR family transcriptional regulator Rv1176c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.