MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1287 · 46 genes shown · anchor cysC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1287 (family_assigned) — RrF2 family transcriptional regulator Rv1287 cysC (requalified) — adenylyl-sulfate kinase cysC cysD (family_assigned) — sulfate adenylyltransferase subunit CysD cysD iscS (family_assigned) — cysteine desulfurase family protein iscS Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 Rv1288 (requalified) — esterase Rv1288 Rv1289 (family_assigned) — hypothetical protein Rv1289 canA (requalified) — beta-carbonic anhydrase CanA canA Rv2204c (requalified) — iron-sulfur cluster assembly accessory protein Rv2204c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv0385 (requalified) — FAD-binding oxidoreductase Rv0385 Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c fdxB (requalified) — fatty acid desaturase fdxB subI (family_assigned) — sulfate ABC transporter substrate-binding protein subI cysT (family_assigned) — sulfate ABC transporter permease subunit CysT cysT cysH (requalified) — phosphoadenylyl-sulfate reductase cysH cysW (family_assigned) — sulfate ABC transporter permease subunit CysW cysW cysA1 (family_assigned) — sulfate ABC transporter ATP-binding protein CysA cysA1 cysQ (requalified) — 3'(2')%2C5'-bisphosphate nucleotidase CysQ cysQ moeB1 (requalified) — adenylyltransferase/sulfurtransferase MoeZ moeB1 moeB2 (requalified) — molybdenum cofactor biosynthesis protein MoeB moeB2 trmU (requalified) — tRNA 2-thiouridine(34) synthase MnmA trmU sseB (requalified) — sulfurtransferase sseB cysA2 (requalified) — sulfurtransferase cysA2 csd (requalified) — cysteine desulfurase csd sufC (requalified) — Fe-S cluster assembly ATPase SufC sufC sufD (requalified) — Fe-S cluster assembly protein SufD sufD Rv1466 (requalified) — metal-sulfur cluster assembly factor Rv1466 sufB (requalified) — intein-containing Fe-S cluster assembly protein Su sufB eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 Rv3594 (requalified) — N-acetylmuramoyl-L-alanine amidase Rv3594 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 Rv0097 (family_assigned) — TauD/TfdA family dioxygenase Rv0097 Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c Rv3273 (requalified) — transmembrane carbonic anhydrase Rv3273 canB (requalified) — beta-carbonic anhydrase CanB canB oppC (family_assigned) — ABC transporter permease oppC oppA (family_assigned) — oligopeptide ABC transporter substrate-binding pro oppA oppB (family_assigned) — ABC transporter permease oppB Rv2205c (requalified) — glycerate kinase Rv2205c nrdH (requalified) — redoxin NrdH nrdH Rv2206 (family_assigned) — DUF3043 domain-containing protein Rv2206 cobT (requalified) — nicotinate-nucleotide--dimethylbenzimidazole phosp cobT cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.