MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1263 · 46 genes shown · anchor gatB · open gene page → · ← back to 1 hop

Evidence: Min score 0
amiB2 (requalified) — amidase amiB2 gatB (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatB acyP (requalified) — acylphosphatase acyP Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 gatC (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatC Rv1264 (requalified) — adenylate cyclase Rv1264 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd aldA (requalified) — aldehyde dehydrogenase aldA Rv1262c (family_assigned) — HIT family protein Rv1262c Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 aspS (requalified) — aspartate--tRNA ligase aspS Rv1261c (requalified) — F420H(2)-dependent quinone reductase Rv1261c gatA (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatA amiD (requalified) — amidase amiD amiA2 (requalified) — amidase amiA2 pta (requalified) — phosphate acetyltransferase pta Rv3175 (requalified) — amidase Rv3175 amiC (requalified) — amidase amiC Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH pykA (requalified) — pyruvate kinase pykA ndkA (requalified) — nucleoside-diphosphate kinase ndkA cpdA (requalified) — 3'%2C5'-cyclic adenosine monophosphate phosphodies cpdA relA (family_assigned) — RelA/SpoT family protein relA ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 acs (requalified) — acetate--CoA ligase acs gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT mmsA (requalified) — CoA-acylating methylmalonate-semialdehyde dehydrog mmsA fadB (requalified) — fatty oxidation protein FadB fadB ackA (requalified) — acetate kinase ackA adhB (requalified) — alcohol dehydrogenase B adhB Rv3292 (family_assigned) — VOC family protein Rv3292 adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 Rv0765c (family_assigned) — SDR family oxidoreductase Rv0765c Rv0770 (requalified) — NAD(P)-dependent oxidoreductase Rv0770 cyp123 (requalified) — cytochrome P450 cyp123 cyp51 (requalified) — lanosterol 14-alpha demethylase cyp51 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ deaD (requalified) — DEAD/DEAH box helicase deaD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.