MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1262c · 46 genes shown · anchor amiB2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1262c (family_assigned) — HIT family protein Rv1262c Rv1261c (requalified) — F420H(2)-dependent quinone reductase Rv1261c amiB2 (requalified) — amidase amiB2 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ deaD (requalified) — DEAD/DEAH box helicase deaD rhlE (requalified) — DEAD/DEAH box helicase rhlE rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB dinG (requalified) — ATP-dependent helicase DinG dinG helZ (requalified) — DEAD/DEAH box helicase helZ ercc3 (requalified) — DNA helicase Ercc3 ercc3 Rv1179c (family_assigned) — DEAD/DEAH box helicase family protein Rv1179c Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c Rv0044c (requalified) — LLM class F420-dependent oxidoreductase Rv0044c fbiA (requalified) — 2-phospho-L-lactate transferase fbiA fgd1 (requalified) — glucose-6-phosphate dehydrogenase (coenzyme-F420) fgd1 fbiB (requalified) — coenzyme F420-0:L-glutamate ligase fbiB gatB (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatB acyP (requalified) — acylphosphatase acyP Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 gatC (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatC Rv1264 (requalified) — adenylate cyclase Rv1264 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 sigA (requalified) — RNA polymerase sigma factor sigA sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c rplD (requalified) — 50S ribosomal protein L4 rplD rplM (requalified) — 50S ribosomal protein L13 rplM Rv1254 (requalified) — acyltransferase Rv1254 rplC (requalified) — 50S ribosomal protein L3 rplC fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2 gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI Rv3212 (family_assigned) — hypothetical protein Rv3212 rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB mec (requalified) — CysO-cysteine peptidase mec Rv1277 (family_assigned) — hypothetical protein Rv1277 polA (requalified) — DNA polymerase I polA Rv2102 (family_assigned) — hypothetical protein Rv2102 Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv0862c (family_assigned) — helicase-associated domain-containing protein Rv0862c Rv2090 (requalified) — 5'-3' exonuclease Rv2090

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.