MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1261c · 43 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1261c (requalified) — F420H(2)-dependent quinone reductase Rv1261c Rv1262c (family_assigned) — HIT family protein Rv1262c Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c Rv0044c (requalified) — LLM class F420-dependent oxidoreductase Rv0044c fbiA (requalified) — 2-phospho-L-lactate transferase fbiA fgd1 (requalified) — glucose-6-phosphate dehydrogenase (coenzyme-F420) fgd1 fbiB (requalified) — coenzyme F420-0:L-glutamate ligase fbiB cofC (requalified) — 2-phospho-L-lactate guanylyltransferase cofC Rv3093c (requalified) — LLM class F420-dependent oxidoreductase Rv3093c fgd2 (requalified) — F420-dependent hydroxymycolic acid dehydrogenase fgd2 Rv1855c (requalified) — LLM class F420-dependent oxidoreductase Rv1855c Rv2893 (requalified) — LLM class F420-dependent oxidoreductase Rv2893 Rv0791c (requalified) — LLM class flavin-dependent oxidoreductase Rv0791c amiB2 (requalified) — amidase amiB2 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ deaD (requalified) — DEAD/DEAH box helicase deaD rhlE (requalified) — DEAD/DEAH box helicase rhlE Rv0940c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv0940c Rv3521 (family_assigned) — hypothetical protein Rv3521 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 ddn (requalified) — deazaflavin-dependent nitroreductase Ddn ddn Rv0045c (family_assigned) — alpha/beta hydrolase Rv0045c ino1 (requalified) — inositol-3-phosphate synthase ino1 Rv0043c (family_assigned) — GntR family transcriptional regulator Rv0043c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC Rv3178 (requalified) — nitroreductase Rv3178 pta (requalified) — phosphate acetyltransferase pta ackA (requalified) — acetate kinase ackA Rv0406c (family_assigned) — beta lactamase-like protein Rv0406c Rv3300c (family_assigned) — RluA family pseudouridine synthase Rv3300c ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv2951c (requalified) — phthiodiolone/phenolphthiodiolone dimycocerosates Rv2951c Rv1856c (family_assigned) — SDR family oxidoreductase Rv1856c Rv3079c (requalified) — LLM class F420-dependent oxidoreductase Rv3079c Rv3072c (family_assigned) — hypothetical protein Rv3072c Rv0790c (family_assigned) — transglutaminase-like domain-containing protein Rv0790c Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv0789c (family_assigned) — hypothetical protein Rv0789c Rv0793 (family_assigned) — putative quinol monooxygenase Rv0793

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.