MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1253 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
deaD (requalified) — DEAD/DEAH box helicase deaD Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c rplD (requalified) — 50S ribosomal protein L4 rplD rplM (requalified) — 50S ribosomal protein L13 rplM Rv1254 (requalified) — acyltransferase Rv1254 rplC (requalified) — 50S ribosomal protein L3 rplC fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2 fusA1 (requalified) — elongation factor G fusA1 rpsD (requalified) — 30S ribosomal protein S4 rpsD ppiA (requalified) — iron-regulated peptidyl-prolyl cis-trans isomerase ppiA ppiB (requalified) — peptidyl-prolyl cis-trans isomerase B ppiB helZ (requalified) — DEAD/DEAH box helicase helZ rplX (requalified) — 50S ribosomal protein L24 rplX Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c rhlE (requalified) — DEAD/DEAH box helicase rhlE gadB (requalified) — glutamate decarboxylase gadB rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsM (requalified) — 30S ribosomal protein S13 rpsM rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rpmE (requalified) — 50S ribosomal protein L31 rpmE rplR (requalified) — 50S ribosomal protein L18 rplR rpmA (requalified) — 50S ribosomal protein L27 rpmA rplQ (requalified) — 50S ribosomal protein L17 rplQ Rv3635 (family_assigned) — hypothetical protein Rv3635 Rv0227c (family_assigned) — membrane protein Rv0227c Rv3906c (requalified) — pullulanase Rv3906c Rv3035 (family_assigned) — hypothetical protein Rv3035 lprE (family_assigned) — LppP/LprE family lipoprotein lprE rplF (requalified) — 50S ribosomal protein L6 rplF rpsE (requalified) — 30S ribosomal protein S5 rpsE rplB (requalified) — 50S ribosomal protein L2 rplB rpsG (requalified) — 30S ribosomal protein S7 rpsG rplE (requalified) — 50S ribosomal protein L5 rplE rpsL (requalified) — 30S ribosomal protein S12 rpsL tuf (requalified) — elongation factor Tu tuf pks12 (requalified) — type I polyketide synthase pks12 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.