MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1251c · 45 genes shown · anchor lprE · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1251c (family_assigned) — TM0106 family RecB-like putative nuclease Rv1251c lprE (family_assigned) — LppP/LprE family lipoprotein lprE Rv0111 (family_assigned) — acyltransferase family protein Rv0111 hsdM (requalified) — class I SAM-dependent DNA methyltransferase hsdM deaD (requalified) — DEAD/DEAH box helicase deaD Rv1254 (requalified) — acyltransferase Rv1254 Rv2345 (family_assigned) — TPM domain-containing protein Rv2345 Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv1419 (requalified) — lectin Rv1419 Rv3054c (requalified) — NADPH-dependent FMN reductase Rv3054c Rv1482c (family_assigned) — hypothetical protein Rv1482c dut (requalified) — deoxyuridine 5'-triphosphate nucleotidohydrolase dut Rv2529 (family_assigned) — hypothetical protein Rv2529 polA (requalified) — DNA polymerase I polA Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c Rv0228 (requalified) — acyltransferase Rv0228 Rv0110 (family_assigned) — integral membrane protein Rv0110 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c gca (requalified) — GDP-mannose 4%2C6-dehydratase gca hsdS (family_assigned) — restriction endonuclease subunit S hsdS vapC21 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC21 thyX (requalified) — FAD-dependent thymidylate synthase thyX Rv2762c (family_assigned) — winged helix-turn-helix domain-containing protein Rv2762c dapA (requalified) — 4-hydroxy-tetrahydrodipicolinate synthase dapA rplD (requalified) — 50S ribosomal protein L4 rplD rplM (requalified) — 50S ribosomal protein L13 rplM rplC (requalified) — 50S ribosomal protein L3 rplC fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2 Rv3635 (family_assigned) — hypothetical protein Rv3635 Rv0227c (family_assigned) — membrane protein Rv0227c Rv3906c (requalified) — pullulanase Rv3906c Rv3035 (family_assigned) — hypothetical protein Rv3035 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD dgt (requalified) — deoxyguanosinetriphosphate triphosphohydrolase dgt qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c rhlE (requalified) — DEAD/DEAH box helicase rhlE gadB (requalified) — glutamate decarboxylase gadB uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC rapZ (requalified) — RNase adapter RapZ rapZ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.