MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1250 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1250 (requalified) — MFS transporter Rv1250 Rv1249c (family_assigned) — hypothetical protein Rv1249c Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv3239c (requalified) — MFS transporter Rv3239c Rv3728 (requalified) — MFS transporter Rv3728 jefA (requalified) — multidrug efflux pump JefA jefA Rv1877 (family_assigned) — MDR family MFS transporter Rv1877 emrB (requalified) — MFS transporter emrB Rv1634 (requalified) — MFS transporter Rv1634 Rv2209 (requalified) — MFS transporter Rv2209 Rv2042c (family_assigned) — ketosteroid isomerase family protein Rv2042c bacA (family_assigned) — vitamin B12 ABC transporter ATP-binding protein Ba bacA mmpL2 (requalified) — RND transporter MmpL2 mmpL2 Rv0264c (family_assigned) — allophanate hydrolase subunit 1 Rv0264c Rv0263c (family_assigned) — 5-oxoprolinase/urea amidolyase family protein Rv0263c Rv1245c (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv1245c Rv1188 (requalified) — proline dehydrogenase Rv1188 Rv1171 (family_assigned) — hypothetical protein Rv1171 lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv3238c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv3238c nadE (requalified) — NAD(+) synthase nadE pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 Rv1716 (family_assigned) — hypothetical protein Rv1716 Rv1718 (requalified) — 3-keto-5-aminohexanoate cleavage protein Rv1718 Rv3727 (requalified) — FAD-dependent oxidoreductase Rv3727 mmuM (requalified) — homocysteine S-methyltransferase mmuM efpA (requalified) — multidrug efflux MFS transporter EfpA efpA Rv1258c (requalified) — MFS transporter Rv1258c Rv1879 (family_assigned) — amidohydrolase family protein Rv1879 glnA3 (family_assigned) — glutamine synthetase family protein glnA3 bfrA (requalified) — bacterioferritin BfrA bfrA hemE (requalified) — uroporphyrinogen decarboxylase hemE Rv0784 (family_assigned) — hypothetical protein Rv0784 dppA (family_assigned) — ABC transporter substrate-binding protein dppA Rv0785 (requalified) — FAD-binding dehydrogenase Rv0785 uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.