MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1249c · 46 genes shown · anchor kgd · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1249c (family_assigned) — hypothetical protein Rv1249c Rv0264c (family_assigned) — allophanate hydrolase subunit 1 Rv0264c Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv0263c (family_assigned) — 5-oxoprolinase/urea amidolyase family protein Rv0263c Rv1245c (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv1245c Rv1188 (requalified) — proline dehydrogenase Rv1188 Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c acs (requalified) — acetate--CoA ligase acs Rv1250 (requalified) — MFS transporter Rv1250 Rv2923c (family_assigned) — OsmC family protein Rv2923c mqo (requalified) — malate dehydrogenase (quinone) mqo Rv2560 (family_assigned) — DUF2189 domain-containing protein Rv2560 aac (requalified) — aminoglycoside 2'-N-acetyltransferase aac Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c oprA (requalified) — osmosensory protein OprA oprA Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 accA3 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA3 accA2 (family_assigned) — biotin carboxylase N-terminal domain-containing pr accA2 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE relB (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant relB Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA proC (requalified) — pyrroline-5-carboxylate reductase proC pip (family_assigned) — proline-specific peptidase family protein pip Rv1186c (family_assigned) — PucR family transcriptional regulator Rv1186c aldC (requalified) — aldehyde dehydrogenase AldC aldC mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv0822c (family_assigned) — LCP family protein Rv0822c adnA (requalified) — ATP-dependent DNA helicase AdnA adnA Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv0188 (requalified) — SPW repeat protein Rv0188 Rv3773c (family_assigned) — TIGR03086 family metal-binding protein Rv3773c gltA2 (requalified) — citrate synthase gltA2 prpC (requalified) — 2-methylcitrate synthase prpC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.