MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1248c · 42 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC sucD (family_assigned) — succinyl-CoA ligase subunit alpha sucD dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 fhaA (requalified) — cell division-associated protein FhaA fhaA bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC bkdA (family_assigned) — pyruvate dehydrogenase (acetyl-transferring) E1 co bkdA gcvH (requalified) — glycine cleavage system protein GcvH gcvH Rv1734c (family_assigned) — hypothetical protein Rv1734c Rv0843 (family_assigned) — thiamine pyrophosphate-dependent dehydrogenase E1 Rv0843 pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB Rv1828 (family_assigned) — MerR family transcriptional regulator Rv1828 gdh (requalified) — NAD-glutamate dehydrogenase gdh pknG (requalified) — serine/threonine protein kinase PknG pknG Rv1829 (family_assigned) — hypothetical protein Rv1829 nadE (requalified) — NAD(+) synthase nadE cobB (requalified) — NAD-dependent protein deacylase cobB pntB (family_assigned) — NAD(P)(+) transhydrogenase (Re/Si-specific) subuni pntB Rv2854 (family_assigned) — alpha/beta hydrolase Rv2854 glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB sdhD (family_assigned) — succinate dehydrogenase hydrophobic membrane ancho sdhD Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA aceE (requalified) — pyruvate dehydrogenase E1 component aceE pknF (requalified) — serine/threonine protein kinase PknF pknF Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv1277 (family_assigned) — hypothetical protein Rv1277 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ fhaB (family_assigned) — FHA domain-containing protein fhaB pknA (requalified) — serine/threonine protein kinase PknA pknA pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.