MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1247c · 45 genes shown · anchor relE · open gene page → · ← back to 1 hop

Evidence: Min score 0
relB (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant relB relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE relG (family_assigned) — type II toxin-antitoxin system RelE/ParE family to relG relK (family_assigned) — Txe/YoeB family addiction module toxin relK Rv1245c (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv1245c mazF2 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF2 mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 mazF3 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF3 Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 relF (requalified) — type II toxin-antitoxin system antitoxin RelF relF Rv2864c (family_assigned) — penicillin-binding protein Rv2864c relJ (requalified) — type II toxin-antitoxin system antitoxin RelJ relJ Rv0268c (family_assigned) — hypothetical protein Rv0268c Rv3359 (requalified) — NADH:flavin oxidoreductase Rv3359 folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD Rv1249c (family_assigned) — hypothetical protein Rv1249c Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 mazE2 (family_assigned) — ribbon-helix-helix protein%2C CopG family mazE2 mazE6 (requalified) — antitoxin MazE6 mazE6 mazE9 (requalified) — antitoxin MazE9 mazE9 mazE5 (requalified) — type II toxin-antitoxin system antitoxin MazE5 mazE5 Rv1944c (family_assigned) — SEC-C domain-containing protein Rv1944c mazF1 (requalified) — toxin MazF1 mazF1 lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA vapB9 (requalified) — antitoxin VapB9 vapB9 vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 Rv3098A (family_assigned) — PemK-like protein Rv3098A Rv0959 (family_assigned) — VWA domain-containing protein Rv0959 Rv0958 (family_assigned) — ATP-binding protein Rv0958 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 vapB12 (requalified) — antitoxin vapB12 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapB47 (requalified) — antitoxin VapB47 vapB47 mazE3 (requalified) — antitoxin MazE3 mazE3 Rv2016 (dark) — hypothetical protein Rv2016

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.