MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1246c · 44 genes shown · anchor relB · open gene page → · ← back to 1 hop

Evidence: Min score 0
relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE relB (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant relB relF (requalified) — type II toxin-antitoxin system antitoxin RelF relF Rv1245c (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv1245c mazF2 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF2 mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 Rv3387 (requalified) — transposase Rv3387 Rv2961 (requalified) — transposase Rv2961 Rv3749c (family_assigned) — hypothetical protein Rv3749c vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 relG (family_assigned) — type II toxin-antitoxin system RelE/ParE family to relG relK (family_assigned) — Txe/YoeB family addiction module toxin relK Rv2864c (family_assigned) — penicillin-binding protein Rv2864c Rv1249c (family_assigned) — hypothetical protein Rv1249c Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 mazE2 (family_assigned) — ribbon-helix-helix protein%2C CopG family mazE2 mazE6 (requalified) — antitoxin MazE6 mazE6 mazE9 (requalified) — antitoxin MazE9 mazE9 mazE5 (requalified) — type II toxin-antitoxin system antitoxin MazE5 mazE5 Rv1944c (family_assigned) — SEC-C domain-containing protein Rv1944c mazF1 (requalified) — toxin MazF1 mazF1 lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA Rv2016 (dark) — hypothetical protein Rv2016 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv2011c (family_assigned) — MarR family winged helix-turn-helix transcriptiona Rv2011c Rv3386 (requalified) — transposase Rv3386 mazF4 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF4 Rv0790c (family_assigned) — transglutaminase-like domain-containing protein Rv0790c vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapB46 (requalified) — antitoxin VapB46 vapB46 Rv2086 (family_assigned) — hypothetical protein Rv2086 Rv2960c (dark) — hypothetical protein Rv2960c Rv3750c (requalified) — excisionase Rv3750c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.