MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1245c · 46 genes shown · anchor kgd · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1245c (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv1245c Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv1249c (family_assigned) — hypothetical protein Rv1249c Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE relB (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant relB Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 Rv3049c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3049c Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c Rv1393c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1393c Rv0976c (family_assigned) — acyclic terpene utilization AtuA family protein Rv0976c tpx (requalified) — thiol peroxidase tpx lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA Rv0264c (family_assigned) — allophanate hydrolase subunit 1 Rv0264c Rv0263c (family_assigned) — 5-oxoprolinase/urea amidolyase family protein Rv0263c Rv1188 (requalified) — proline dehydrogenase Rv1188 Rv1171 (family_assigned) — hypothetical protein Rv1171 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 Rv3553 (requalified) — nitronate monooxygenase Rv3553 fas (requalified) — fatty acid synthase fas relF (requalified) — type II toxin-antitoxin system antitoxin RelF relF mazF2 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF2 mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5 relG (family_assigned) — type II toxin-antitoxin system RelE/ParE family to relG relK (family_assigned) — Txe/YoeB family addiction module toxin relK fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 Rv1716 (family_assigned) — hypothetical protein Rv1716 Rv1717 (family_assigned) — cupin domain-containing protein Rv1717 Rv1718 (requalified) — 3-keto-5-aminohexanoate cleavage protein Rv1718 Rv3728 (requalified) — MFS transporter Rv3728 Rv1719 (family_assigned) — IclR family transcriptional regulator Rv1719 Rv3050c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3050c nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI Rv3085 (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv3085 Rv3741c (requalified) — oxidoreductase Rv3741c Rv3538 (requalified) — dehydrogenase Rv3538 htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.