MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1244 · 46 genes shown · anchor proV · open gene page → · ← back to 1 hop

Evidence: Min score 0
lpqZ (family_assigned) — glycine betaine ABC transporter substrate-binding lpqZ proV (family_assigned) — glycine betaine/L-proline ABC transporter ATP-bind proV Rv1234 (requalified) — general stress protein Rv1234 proX (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proX proW (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proW proZ (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proZ mdh (requalified) — malate dehydrogenase mdh corA (requalified) — magnesium/cobalt transporter CorA corA Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c lpqD (family_assigned) — histidine phosphatase family protein lpqD Rv3492c (requalified) — Mce associated protein Rv3492c pirG (requalified) — exported repetitive protein pirG PE_PGRS23 (family_assigned) — PE-PGRS family protein PE_PGRS23 PE_PGRS23 Rv3755c (family_assigned) — putative glycolipid-binding domain-containing prot Rv3755c Rv3760 (family_assigned) — membrane protein Rv3760 lpqY (family_assigned) — trehalose ABC transporter substrate-binding protei lpqY sugA (family_assigned) — trehalose ABC transporter permease SugA sugA sugC (family_assigned) — trehalose ABC transporter ATP-binding protein SugC sugC sugB (family_assigned) — trehalose ABC transporter permease SugB sugB Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c citA (requalified) — citrate synthase 2 citA gltA2 (requalified) — citrate synthase gltA2 prpC (requalified) — 2-methylcitrate synthase prpC fum (requalified) — class II fumarate hydratase fum mez (requalified) — NAD-dependent malic enzyme mez pca (requalified) — pyruvate carboxylase pca Rv2323c (family_assigned) — hypothetical protein Rv2323c vapB33 (requalified) — type II toxin-antitoxin system antitoxin VapB33 vapB33 glcB (requalified) — malate synthase G glcB Rv1835c (family_assigned) — CocE/NonD family hydrolase Rv1835c Rv1324 (requalified) — co-chaperone YbbN Rv1324 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 acrA1 (family_assigned) — SDR family oxidoreductase acrA1 htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv0365c (family_assigned) — glycoside hydrolase family 76 protein Rv0365c cobQ1 (requalified) — cobyric acid synthase cobQ1 mce4D (family_assigned) — virulence factor Mce family protein mce4D lprN (family_assigned) — Mce family lipoprotein LprN lprN mce4F (family_assigned) — virulence factor Mce family protein mce4F Rv3493c (requalified) — mammalian cell entry protein Rv3493c mce4A (family_assigned) — Mce family protein Mce4A mce4A mce4C (family_assigned) — virulence factor Mce family protein mce4C Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv0312 (family_assigned) — Hsp70 family protein Rv0312

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.