MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1230c · 46 genes shown · anchor mrp · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1230c (family_assigned) — lytic transglycosylase domain-containing protein Rv1230c mrp (family_assigned) — Mrp/NBP35 family ATP-binding protein mrp Rv1231c (family_assigned) — DUF1003 domain-containing protein Rv1231c Rv1232c (requalified) — magnesium transporter Rv1232c Rv3594 (requalified) — N-acetylmuramoyl-L-alanine amidase Rv3594 Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv3365c (requalified) — sensor histidine kinase Rv3365c Rv1233c (family_assigned) — DUF4190 domain-containing protein Rv1233c adnB (requalified) — ATP-dependent DNA helicase AdnB adnB Rv2542 (family_assigned) — alpha/beta hydrolase family protein Rv2542 Rv0345 (family_assigned) — hypothetical protein Rv0345 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG Rv1234 (requalified) — general stress protein Rv1234 sugA (family_assigned) — trehalose ABC transporter permease SugA sugA sugC (family_assigned) — trehalose ABC transporter ATP-binding protein SugC sugC Rv1443c (family_assigned) — hypothetical protein Rv1443c espK (family_assigned) — ESX-1 secretion-associated protein EspK espK Rv1288 (requalified) — esterase Rv1288 lppF (requalified) — haloacid dehalogenase-like hydrolase lppF pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB ftsQ (requalified) — cell division protein FtsQ ftsQ rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH mraZ (requalified) — division/cell wall cluster transcriptional repress mraZ ptrp (family_assigned) — hypothetical protein ptrp Rv3909 (dark) — hypothetical protein Rv3909 Rv3363c (family_assigned) — DUF742 domain-containing protein Rv3363c Rv3362c (family_assigned) — ATP/GTP-binding protein Rv3362c Rv3364c (requalified) — serine protease inhibitor Rv3364c mfpA (requalified) — pentapeptide repeat protein MfpA mfpA Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB adnA (requalified) — ATP-dependent DNA helicase AdnA adnA uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 Rv3200c (family_assigned) — potassium channel family protein Rv3200c nudC (requalified) — NAD(+) diphosphatase nudC pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 esxA (requalified) — ESAT-6 protein EsxA esxA eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.