MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1225c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1225c (family_assigned) — HAD-IIA family hydrolase Rv1225c Rv1226c (family_assigned) — PH domain-containing protein Rv1226c Rv1227c (family_assigned) — PH domain-containing protein Rv1227c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP cmk (requalified) — (d)CMP kinase cmk Rv3760 (family_assigned) — membrane protein Rv3760 rsmD (requalified) — 16S rRNA (guanine(966)-N(2))-methyltransferase Rsm rsmD lspA (requalified) — signal peptidase II lspA Rv3365c (requalified) — sensor histidine kinase Rv3365c lpqX (dark) — hypothetical protein lpqX eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 Rv1234 (requalified) — general stress protein Rv1234 Rv3278c (family_assigned) — PH domain-containing protein Rv3278c moeA2 (requalified) — molybdopterin molybdenumtransferase moeA2 pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknA (requalified) — serine/threonine protein kinase PknA pknA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA pknD (requalified) — serine/threonine protein kinase PknD pknD engA (requalified) — ribosome biogenesis GTPase Der engA Rv1711 (requalified) — pseudouridine synthase Rv1711 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA rpsA (requalified) — 30S ribosomal protein S1 rpsA aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA proV (family_assigned) — glycine betaine/L-proline ABC transporter ATP-bind proV proX (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proX proZ (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proZ proW (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proW Rv3755c (family_assigned) — putative glycolipid-binding domain-containing prot Rv3755c Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB pca (requalified) — pyruvate carboxylase pca yidD (requalified) — membrane protein insertion efficiency factor YidD yidD Rv2968c (family_assigned) — vitamin K epoxide reductase family protein Rv2968c Rv2969c (requalified) — mycothiol-dependent reductase Rv2969c lipN (requalified) — lipase/esterase LipN lipN Rv1540 (requalified) — RNA pseudouridine synthase Rv1540 ansA (requalified) — asparaginase ansA rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA ileS (requalified) — isoleucine--tRNA ligase ileS ftsW (family_assigned) — putative lipid II flippase FtsW ftsW lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.