MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1220c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1220c (requalified) — methyltransferase Rv1220c Rv1703c (requalified) — O-methyltransferase Rv1703c raaS (family_assigned) — transcriptional regulator RaaS raaS Rv1217c (family_assigned) — multidrug efflux ABC transporter permease Rv1217c sigE (requalified) — RNA polymerase sigma factor SigE sigE Rv1216c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv1216c Rv1218c (family_assigned) — multidrug efflux ABC transporter ATP-binding prote Rv1218c Rv1215c (family_assigned) — CocE/NonD family hydrolase Rv1215c rseA (requalified) — anti-sigma E factor RseA rseA Rv2372c (requalified) — 16S rRNA (uracil(1498)-N(3))-methyltransferase Rv2372c tesA (requalified) — thioesterase TesA tesA scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB tatB (requalified) — Sec-independent protein translocase protein TatB tatB aofH (family_assigned) — flavin monoamine oxidase family protein aofH adhB (requalified) — alcohol dehydrogenase B adhB adh (requalified) — zinc-binding dehydrogenase adh adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 mmpS5 (requalified) — siderophore transporter accessory protein MmpS5 mmpS5 Rv1686c (family_assigned) — ABC transporter permease Rv1686c sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD htrA (requalified) — serine protease HtrA htrA rplC (requalified) — 50S ribosomal protein L3 rplC cysA1 (family_assigned) — sulfate ABC transporter ATP-binding protein CysA cysA1 Rv2800 (family_assigned) — CocE/NonD family hydrolase Rv2800 PE14 (family_assigned) — PE family protein PE14 PE14 Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c Rv1083 (dark) — hypothetical protein Rv1083 dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 hrcA (requalified) — heat-inducible transcriptional repressor HrcA hrcA era (requalified) — GTPase Era era Rv2365c (requalified) — cytidine deaminase Rv2365c Rv2366c (family_assigned) — hemolysin family protein Rv2366c Rv2367c (requalified) — endoribonuclease Rv2367c ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB ppsA (requalified) — phthiocerol type I polyketide synthase PpsA ppsA ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks13 (requalified) — polyketide synthase Pks13 pks13 ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD scpA (requalified) — segregation/condensation protein A scpA cmk (requalified) — (d)CMP kinase cmk Rv1711 (requalified) — pseudouridine synthase Rv1711 engA (requalified) — ribosome biogenesis GTPase Der engA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.