MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1218c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1218c (family_assigned) — multidrug efflux ABC transporter ATP-binding prote Rv1218c Rv1217c (family_assigned) — multidrug efflux ABC transporter permease Rv1217c raaS (family_assigned) — transcriptional regulator RaaS raaS cysA1 (family_assigned) — sulfate ABC transporter ATP-binding protein CysA cysA1 Rv1216c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv1216c Rv1686c (family_assigned) — ABC transporter permease Rv1686c Rv1215c (family_assigned) — CocE/NonD family hydrolase Rv1215c Rv1272c (family_assigned) — fatty acid ABC transporter ATP-binding protein/per Rv1272c drrC (family_assigned) — ABC transporter permease drrC Rv1273c (family_assigned) — ABC transporter ATP-binding protein Rv1273c irtA (family_assigned) — iron ABC transporter ATP-binding protein/permease irtA irtB (family_assigned) — iron ABC transporter ATP-binding protein/permease irtB Rv0194 (family_assigned) — ABC transporter ATP-binding protein Rv0194 Rv1220c (requalified) — methyltransferase Rv1220c mmpS5 (requalified) — siderophore transporter accessory protein MmpS5 mmpS5 cysW (family_assigned) — sulfate ABC transporter permease subunit CysW cysW cysT (family_assigned) — sulfate ABC transporter permease subunit CysT cysT subI (family_assigned) — sulfate ABC transporter substrate-binding protein subI cysC (requalified) — adenylyl-sulfate kinase cysC cysD (family_assigned) — sulfate adenylyltransferase subunit CysD cysD modB (family_assigned) — ABC transporter permease modB rplC (requalified) — 50S ribosomal protein L3 rplC Rv1687c (family_assigned) — ABC transporter ATP-binding protein Rv1687c Rv1685c (family_assigned) — TetR family transcriptional regulator Rv1685c mpg (requalified) — DNA-3-methyladenine glycosylase mpg tyrS (requalified) — tyrosine--tRNA ligase tyrS Rv2800 (family_assigned) — CocE/NonD family hydrolase Rv2800 PE14 (family_assigned) — PE family protein PE14 PE14 lprC (family_assigned) — DUF3558 domain-containing protein lprC lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv0435c (family_assigned) — AAA family ATPase Rv0435c eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 drrA (family_assigned) — daunorubicin ABC transporter ATP-binding protein D drrA drrB (family_assigned) — daunorubicin ABC transporter permease DrrB drrB ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA mbtI (requalified) — salicylate synthase mbtI Rv3402c (family_assigned) — DegT/DnrJ/EryC1/StrS family aminotransferase Rv3402c mbtE (requalified) — peptide synthetase mbtE mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG dnaK (requalified) — molecular chaperone DnaK dnaK

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.