MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1204c · 46 genes shown · anchor lprB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1204c (family_assigned) — hypothetical protein Rv1204c Rv1203c (family_assigned) — hypothetical protein Rv1203c lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 Rv1205 (family_assigned) — TIGR00730 family Rossman fold protein Rv1205 Rv2405 (family_assigned) — hypothetical protein Rv2405 lprC (family_assigned) — DUF3558 domain-containing protein lprC Rv0010c (family_assigned) — PH domain-containing protein Rv0010c Rv2876 (requalified) — transmembrane protein Rv2876 lppM (requalified) — lipoprotein LppM lppM Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c Rv3668c (requalified) — protease Rv3668c Rv3035 (family_assigned) — hypothetical protein Rv3035 rplS (requalified) — 50S ribosomal protein L19 rplS rplT (requalified) — 50S ribosomal protein L20 rplT rplQ (requalified) — 50S ribosomal protein L17 rplQ rplM (requalified) — 50S ribosomal protein L13 rplM rplN (requalified) — 50S ribosomal protein L14 rplN ephC (requalified) — epoxide hydrolase EphC ephC pks13 (requalified) — polyketide synthase Pks13 pks13 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 fadD6 (requalified) — long-chain-acyl-CoA synthetase FadD6 fadD6 gpgS (requalified) — glucosyl-3-phosphoglycerate synthase gpgS folP2 (requalified) — dihydropteroate synthase folP2 tagA (requalified) — DNA-3-methyladenine glycosylase I tagA lepA (requalified) — translation elongation factor 4 lepA lppR (family_assigned) — sensor domain-containing protein lppR mazE6 (requalified) — antitoxin MazE6 mazE6 Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c rpmA (requalified) — 50S ribosomal protein L27 rpmA rplU (requalified) — 50S ribosomal protein L21 rplU crgA (requalified) — cell division protein CrgA crgA Rv3839 (requalified) — DUF2470 domain-containing protein Rv3839 cfp6 (requalified) — low molecular weight protein antigen 6 cfp6 Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv1100 (family_assigned) — hypothetical protein Rv1100 ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c qcrC (requalified) — cytochrome c qcrC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.