MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1202 · 46 genes shown · anchor dapF · open gene page → · ← back to 1 hop

Evidence: Min score 0
dapE (requalified) — succinyl-diaminopimelate desuccinylase DapE dapE dapF (requalified) — diaminopimelate epimerase dapF argD (requalified) — acetylornithine transaminase argD dapC (requalified) — pyridoxal phosphate-dependent aminotransferase dapC dapD (requalified) — 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxyla dapD dapC (requalified) — succinyldiaminopimelate transaminase dapC argC (requalified) — N-acetyl-gamma-glutamyl-phosphate reductase argC argG (requalified) — argininosuccinate synthase argG glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS serC (requalified) — phosphoserine transaminase serC pmmA (requalified) — phosphomannomutase/phosphoglucomutase pmmA gpgS (requalified) — glucosyl-3-phosphoglycerate synthase gpgS dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB lysA (requalified) — diaminopimelate decarboxylase lysA murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA Rv2728c (family_assigned) — hypothetical protein Rv2728c hflX (family_assigned) — GTP-binding protein HflX hflX argJ (requalified) — bifunctional glutamate N-acetyltransferase/amino-a argJ argB (requalified) — acetylglutamate kinase argB argF (requalified) — ornithine carbamoyltransferase argF argR (requalified) — arginine repressor argR fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadB (requalified) — fatty oxidation protein FadB fadB pheA (requalified) — prephenate dehydratase pheA guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA amiA1 (requalified) — N-acyl-L-amino acid amidohydrolase AmiA amiA1 fdxC (family_assigned) — ferredoxin family protein fdxC hemD (requalified) — uroporphyrin-III C-methyltransferase hemD Rv1176c (family_assigned) — PadR family transcriptional regulator Rv1176c argH (requalified) — argininosuccinate lyase argH gltB (family_assigned) — glutamate synthase large subunit gltB mrsA (requalified) — phosphoglucosamine mutase mrsA glnA2 (family_assigned) — glutamine synthetase family protein glnA2 carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 glnA3 (family_assigned) — glutamine synthetase family protein glnA3 serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1 serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 thrC (requalified) — threonine synthase thrC serB2 (requalified) — phosphoserine phosphatase SerB serB2 Rv3684 (requalified) — lyase Rv3684 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 manA (requalified) — mannose-6-phosphate isomerase%2C class I manA manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB pmmB (requalified) — phospho-sugar mutase pmmB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.