MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1187 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA Rv1188 (requalified) — proline dehydrogenase Rv1188 rocD1 (family_assigned) — Probable ornithine aminotransferase (N-terminus pa rocD1 gltB (family_assigned) — glutamate synthase large subunit gltB gadB (requalified) — glutamate decarboxylase gadB gltD (family_assigned) — glutamate synthase subunit beta gltD gdh (requalified) — NAD-glutamate dehydrogenase gdh glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 glnA4 (family_assigned) — glutamine synthetase family protein glnA4 glnA3 (family_assigned) — glutamine synthetase family protein glnA3 proC (requalified) — pyrroline-5-carboxylate reductase proC glnA2 (family_assigned) — glutamine synthetase family protein glnA2 proB (requalified) — glutamate 5-kinase proB pip (family_assigned) — proline-specific peptidase family protein pip Rv1186c (family_assigned) — PucR family transcriptional regulator Rv1186c aldC (requalified) — aldehyde dehydrogenase AldC aldC Rv1249c (family_assigned) — hypothetical protein Rv1249c rocD2 (family_assigned) — Probable ornithine aminotransferase (C-terminus pa rocD2 Rv2323c (family_assigned) — hypothetical protein Rv2323c rocE (requalified) — amino acid permease rocE Rv2319c (requalified) — universal stress protein Rv2319c fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB panC (requalified) — pantoate--beta-alanine ligase panC gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 Rv2475c (family_assigned) — thioesterase family protein Rv2475c garA (requalified) — glycogen accumulation regulator GarA garA aspC (requalified) — pyridoxal phosphate-dependent aminotransferase aspC glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA Rv2857c (requalified) — 3-oxoacyl-ACP reductase Rv2857c Rv2859c (requalified) — gamma-glutamyl-gamma-aminobutyrate hydrolase Rv2859c Rv1879 (family_assigned) — amidohydrolase family protein Rv1879 Rv0499 (family_assigned) — thioesterase family protein Rv0499 Rv0498 (requalified) — sugar phosphate isomerase/epimerase Rv0498 purF (requalified) — amidophosphoribosyltransferase purF proA (requalified) — glutamate-5-semialdehyde dehydrogenase proA obg (requalified) — GTPase ObgE obg rpmA (requalified) — 50S ribosomal protein L27 rpmA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.