MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1178 · 46 genes shown · anchor fdxC · open gene page → · ← back to 1 hop

Evidence: Min score 0
dapC (requalified) — succinyldiaminopimelate transaminase dapC fdxC (family_assigned) — ferredoxin family protein fdxC hemD (requalified) — uroporphyrin-III C-methyltransferase hemD lysA (requalified) — diaminopimelate decarboxylase lysA Rv1176c (family_assigned) — PadR family transcriptional regulator Rv1176c dapE (requalified) — succinyl-diaminopimelate desuccinylase DapE dapE dapF (requalified) — diaminopimelate epimerase dapF ask (requalified) — aspartate kinase ask fadE35 (requalified) — DNA alkylation response protein fadE35 serC (requalified) — phosphoserine transaminase serC thrA (requalified) — homoserine dehydrogenase thrA dapA (requalified) — 4-hydroxy-tetrahydrodipicolinate synthase dapA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH desA1 (requalified) — acyl-ACP desaturase DesA desA1 desA2 (requalified) — acyl-ACP desaturase desA2 dusB (requalified) — tRNA dihydrouridine synthase DusB dusB Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c hemC (requalified) — hydroxymethylbilane synthase hemC hemB (requalified) — porphobilinogen synthase hemB cysG (requalified) — uroporphyrinogen-III C-methyltransferase cysG hemA (requalified) — glutamyl-tRNA reductase hemA cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv0514 (dark) — hypothetical protein Rv0514 murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE argS (requalified) — arginine--tRNA ligase argS thrC (requalified) — threonine synthase thrC dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv0158 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0158 argD (requalified) — acetylornithine transaminase argD dapC (requalified) — pyridoxal phosphate-dependent aminotransferase dapC dapD (requalified) — 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxyla dapD argC (requalified) — N-acetyl-gamma-glutamyl-phosphate reductase argC miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA Rv2728c (family_assigned) — hypothetical protein Rv2728c hflX (family_assigned) — GTP-binding protein HflX hflX asd (requalified) — aspartate-semialdehyde dehydrogenase asd asnB (requalified) — asparagine synthase (glutamine-hydrolyzing) asnB purA (requalified) — adenylosuccinate synthase purA argG (requalified) — argininosuccinate synthase argG nadB (requalified) — L-aspartate oxidase nadB fadB (requalified) — fatty oxidation protein FadB fadB fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fadE18 (family_assigned) — acyl-CoA dehydrogenase family protein fadE18

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.