MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1172c · 41 genes shown · anchor fbiC · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE12 (family_assigned) — PE family protein PE12 PE12 fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC vapB28 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB28 nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI hsdM (requalified) — class I SAM-dependent DNA methyltransferase hsdM ctaE (family_assigned) — heme-copper oxidase subunit III ctaE eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c fbiA (requalified) — 2-phospho-L-lactate transferase fbiA thiG (requalified) — thiazole synthase thiG thiC (requalified) — phosphomethylpyrimidine synthase ThiC thiC thiE (requalified) — thiamine phosphate synthase thiE rsbW (requalified) — anti-sigma B factor RsbW rsbW vapC28 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC28 Rv0609A (dark) — hypothetical protein Rv0609A Rv0607 (dark) — hypothetical protein Rv0607 Rv0605 (family_assigned) — IS607-like element IS1536 family transposase Rv0605 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoN (family_assigned) — NADH-quinone oxidoreductase subunit NuoN nuoN nuoJ (family_assigned) — NADH-quinone oxidoreductase subunit J nuoJ nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG nuoH (family_assigned) — NADH-quinone oxidoreductase subunit NuoH nuoH nuoE (family_assigned) — NADH-quinone oxidoreductase subunit NuoE nuoE hsdS (family_assigned) — restriction endonuclease subunit S hsdS vapC21 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC21 thyX (requalified) — FAD-dependent thymidylate synthase thyX Rv2762c (family_assigned) — winged helix-turn-helix domain-containing protein Rv2762c dapA (requalified) — 4-hydroxy-tetrahydrodipicolinate synthase dapA ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC qcrC (requalified) — cytochrome c qcrC qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 PPE4 (family_assigned) — PPE family protein PPE4 PPE4

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.