MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1165 · 46 genes shown · anchor lpqW · open gene page → · ← back to 1 hop

Evidence: Min score 0
typA (requalified) — translational GTPase TypA typA lpqW (requalified) — lipoarabinomannan biosynthesis protein LpqW lpqW narJ (family_assigned) — nitrate reductase subunit delta narJ narH (family_assigned) — nitrate reductase subunit beta narH narI (family_assigned) — respiratory nitrate reductase subunit gamma narI narG (family_assigned) — nitrate reductase subunit alpha narG rplA (requalified) — 50S ribosomal protein L1 rplA engA (requalified) — ribosome biogenesis GTPase Der engA guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsB (requalified) — 30S ribosomal protein S2 rpsB rplD (requalified) — 50S ribosomal protein L4 rplD rpsD (requalified) — 30S ribosomal protein S4 rpsD Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv3212 (family_assigned) — hypothetical protein Rv3212 narK2 (requalified) — nitrate transporter NarK narK2 narX (family_assigned) — respiratory nitrate reductase subunit gamma narX narK1 (requalified) — nitrate/nitrite transporter narK1 narU (family_assigned) — NarK family nitrate/nitrite MFS transporter narU rplO (requalified) — 50S ribosomal protein L15 rplO rplK (requalified) — 50S ribosomal protein L11 rplK rplP (requalified) — 50S ribosomal protein L16 rplP rplJ (requalified) — 50S ribosomal protein L10 rplJ rplV (requalified) — 50S ribosomal protein L22 rplV rpmC (requalified) — 50S ribosomal protein L29 rpmC cmk (requalified) — (d)CMP kinase cmk Rv1711 (requalified) — pseudouridine synthase Rv1711 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA Rv1708 (requalified) — initiation inhibitor protein Rv1708 dnaG (requalified) — DNA primase dnaG guaB2 (requalified) — IMP dehydrogenase guaB2 guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 apt (requalified) — adenine phosphoribosyltransferase apt argS (requalified) — arginine--tRNA ligase argS rpsC (requalified) — 30S ribosomal protein S3 rpsC rplU (requalified) — 50S ribosomal protein L21 rplU rplI (requalified) — 50S ribosomal protein L9 rplI rpmD (requalified) — 50S ribosomal protein L30 rpmD rplM (requalified) — 50S ribosomal protein L13 rplM rpsR2 (requalified) — 30S ribosomal protein S18 rpsR2 rpsG (requalified) — 30S ribosomal protein S7 rpsG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.