MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1156 · 46 genes shown · anchor ligC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1156 (requalified) — HhH-GPD-type base excision DNA repair protein Rv1156 xthA (requalified) — exodeoxyribonuclease III protein XthA xthA Rv2828A (dark) — hypothetical protein Rv2828A ligC (requalified) — ATP-dependent DNA ligase ligC Rv0393 (family_assigned) — hypothetical protein Rv0393 end (requalified) — deoxyribonuclease IV end Rv1155 (requalified) — PPOX class F420-dependent oxidoreductase Rv1155 Rv2074 (requalified) — F420-dependent biliverdin reductase Rv2074 Rv0944 (requalified) — formamidopyrimidine-DNA glycosylase Rv0944 Rv2618 (family_assigned) — hypothetical protein Rv2618 Rv3394c (family_assigned) — DNA polymerase Y family protein Rv3394c Rv2090 (requalified) — 5'-3' exonuclease Rv2090 trpA (family_assigned) — tryptophan synthase subunit alpha trpA def (requalified) — peptide deformylase def Rv0428c (family_assigned) — GNAT family N-acetyltransferase Rv0428c mutY (requalified) — A/G-specific adenine glycosylase mutY lppK (family_assigned) — hypothetical protein lppK dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv2828c (family_assigned) — DUF1802 family protein Rv2828c vapB22 (family_assigned) — type II toxin-antitoxin system prevent-host-death vapB22 vapC22 (family_assigned) — PIN domain-containing protein vapC22 echA16 (requalified) — enoyl-CoA hydratase echA16 ligD (requalified) — non-homologous end-joining DNA ligase ligD Rv0269c (requalified) — DNA polymerase domain-containing protein Rv0269c mku (requalified) — Ku protein mku Rv1765c (family_assigned) — hypothetical protein Rv1765c Rv1587c (family_assigned) — hypothetical protein Rv1587c Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c Rv0094c (family_assigned) — hypothetical protein Rv0094c Rv3467 (family_assigned) — hypothetical protein Rv3467 Rv1148c (family_assigned) — hypothetical protein Rv1148c lpqP (family_assigned) — PHB depolymerase family esterase lpqP fadE8 (family_assigned) — acyl-CoA dehydrogenase family protein fadE8 Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 echA4 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA4 echA5 (requalified) — enoyl-CoA hydratase EchA5 echA5 Rv1875 (requalified) — PPOX class F420-dependent oxidoreductase Rv1875 Rv1154c (family_assigned) — hypothetical protein Rv1154c Rv3463 (requalified) — LLM class F420-dependent oxidoreductase Rv3463 omt (requalified) — class I SAM-dependent methyltransferase omt Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 Rv2073c (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv2073c cobK (requalified) — cobalt-precorrin-6A reductase cobK cobM (requalified) — precorrin-4 C(11)-methyltransferase cobM cobL (requalified) — bifunctional cobalt-precorrin-7 (C(5))-methyltrans cobL fpg (requalified) — DNA-formamidopyrimidine glycosylase fpg

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.