MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1146 · 45 genes shown · anchor mmpL13a · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1146 (requalified) — transmembrane transport protein Rv1146 Rv1145 (requalified) — transmembrane transport protein Rv1145 Rv1147 (family_assigned) — methyltransferase domain-containing protein Rv1147 rslA (requalified) — anti-sigma-L factor RslA rslA Rv2714 (family_assigned) — PAC2 family protein Rv2714 mmpL11 (requalified) — RND transporter MmpL11 mmpL11 PE_PGRS22 (family_assigned) — PE-PGRS family protein PE_PGRS22 PE_PGRS22 PE_PGRS59 (family_assigned) — PE-PGRS family protein PE_PGRS59 PE_PGRS59 PE_PGRS25 (family_assigned) — PE-PGRS family protein PE_PGRS25 PE_PGRS25 celA2a (family_assigned) — Probable cellulase CelA2a (endo-1,4-beta-glucanase celA2a celA2b (family_assigned) — Probable cellulase CelA2b (endo-1,4-beta-glucanase celA2b Rv3566A (dark) — hypothetical protein Rv3566A PPE9 (family_assigned) — PPE family protein PPE9 PPE9 mmpL6 (requalified) — transmembrane transport protein MmpL6 mmpL6 mmpL2 (requalified) — RND transporter MmpL2 mmpL2 mmpL1 (requalified) — RND transporter MmpL1 mmpL1 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 Rv0187 (requalified) — O-methyltransferase Rv0187 cobB (requalified) — NAD-dependent protein deacylase cobB hemZ (requalified) — ferrochelatase hemZ sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL Rv0737 (family_assigned) — MarR family transcriptional regulator Rv0737 Rv1138c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1138c pks10 (requalified) — type III polyketide synthase pks10 Rv2715 (family_assigned) — alpha/beta hydrolase Rv2715 Rv2716 (family_assigned) — PhzF family phenazine biosynthesis protein Rv2716 sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 Rv3129 (family_assigned) — Conserved hypothetical protein Rv3129 Rv0201c (family_assigned) — XRE family transcriptional regulator Rv0201c Rv3909 (dark) — hypothetical protein Rv3909 Rv1101c (family_assigned) — AI-2E family transporter Rv1101c aac (requalified) — aminoglycoside 2'-N-acetyltransferase aac Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 PPE13 (family_assigned) — PPE family protein PPE13 PPE13 Rv2020c (family_assigned) — Conserved hypothetical protein Rv2020c PPE5 (family_assigned) — PPE family protein PPE5 PPE5 clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 PPE7 (family_assigned) — PPE family protein PPE7 PPE7 vapC10 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC10 vapB10 (family_assigned) — CopG family transcriptional regulator vapB10 ripC (requalified) — peptidoglycan hydrolase RipC ripC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.