MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1135c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE16 (family_assigned) — PPE family protein PPE16 PPE16 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv1004c (family_assigned) — hypothetical protein Rv1004c PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 PE_PGRS23 (family_assigned) — PE-PGRS family protein PE_PGRS23 PE_PGRS23 espE (requalified) — type VII secretion system ESX-1 associated protein espE PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 Rv2209 (requalified) — MFS transporter Rv2209 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2086 (family_assigned) — hypothetical protein Rv2086 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv2083 (dark) — hypothetical protein Rv2083 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv2084 (dark) — hypothetical protein Rv2084 rplD (requalified) — 50S ribosomal protein L4 rplD ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY rpsB (requalified) — 30S ribosomal protein S2 rpsB rplJ (requalified) — 50S ribosomal protein L10 rplJ rplX (requalified) — 50S ribosomal protein L24 rplX rplW (requalified) — 50S ribosomal protein L23 rplW PPE54 (family_assigned) — PPE family protein PPE54 PPE54 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 PPE12 (family_assigned) — PPE family protein PPE12 PPE12 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE40 (family_assigned) — PPE family protein PPE40 PPE40 PPE24 (family_assigned) — PPE family protein PPE24 PPE24 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PE_PGRS37 (family_assigned) — PE-PGRS family protein PE_PGRS37 PE_PGRS37 PPE35 (family_assigned) — PPE family protein PPE35 PPE35 espG1 (requalified) — type VII secretion system ESX-1 adaptor EspG1 espG1 espI (family_assigned) — MinD/ParA family protein espI PPE68 (family_assigned) — PPE family protein PPE68 PPE68 iniB (requalified) — isoniazid-induced protein IniB iniB ift (requalified) — necrotizing toxin immunity factor IFT ift esxE (requalified) — ESAT-6 like protein EsxE esxE esxF (requalified) — pore-forming CpnT exporter EsxF esxF Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.