MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1135A · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1135A (family_assigned) — Possible acetyl-CoA acetyltransferase (acetoacetyl Rv1135A fadB (requalified) — fatty oxidation protein FadB fadB Rv1136 (family_assigned) — Possible enoyl-CoA hydratase Rv1136 celA2a (family_assigned) — Probable cellulase CelA2a (endo-1,4-beta-glucanase celA2a tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c echA13 (requalified) — enoyl-CoA hydratase echA13 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 echA11 (requalified) — enoyl-CoA hydratase echA11 Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c echA12 (requalified) — enoyl-CoA hydratase echA12 echA10 (requalified) — enoyl-CoA hydratase echA10 fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 fas (requalified) — fatty acid synthase fas fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 echA18 (requalified) — enoyl-CoA hydratase echA18 echA6 (requalified) — enoyl-CoA hydratase echA6 celA2b (family_assigned) — Probable cellulase CelA2b (endo-1,4-beta-glucanase celA2b celA1 (requalified) — cellulase CelA celA1 bglS (requalified) — beta-glucosidase BglS bglS cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c Rv0603 (family_assigned) — hypothetical protein Rv0603 trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS prrB (requalified) — two-component system sensor histidine kinase PrrB prrB cobB (requalified) — NAD-dependent protein deacylase cobB Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv1931c (family_assigned) — transcriptional regulator Rv1931c oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 fadE17 (requalified) — acyl-CoA dehydrogenase fadE17 fadE18 (family_assigned) — acyl-CoA dehydrogenase family protein fadE18 Rv1936 (requalified) — LLM class flavin-dependent oxidoreductase Rv1936 fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.