MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1130 · 46 genes shown · anchor prpC · open gene page → · ← back to 1 hop

Evidence: Min score 0
prpD (requalified) — 2-methylcitrate dehydratase prpD prpC (requalified) — 2-methylcitrate synthase prpC Rv1129c (family_assigned) — short-chain fatty acyl-CoA regulator family protei Rv1129c Rv1132 (family_assigned) — DUF3556 domain-containing protein Rv1132 Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c gltA2 (requalified) — citrate synthase gltA2 ramB (family_assigned) — acetate metabolism transcriptional regulator RamB ramB citA (requalified) — citrate synthase 2 citA citE (family_assigned) — citrate (pro-3S)-lyase subunit beta citE mdh (requalified) — malate dehydrogenase mdh acs (requalified) — acetate--CoA ligase acs accD2 (family_assigned) — acyl-CoA carboxylase subunit beta accD2 accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 acn (requalified) — iron-regulated aconitate hydratase Acn acn bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC glcB (requalified) — malate synthase G glcB Rv1128c (family_assigned) — hypothetical protein Rv1128c Rv0332 (family_assigned) — hypothetical protein Rv0332 Rv0366c (family_assigned) — zeta toxin family protein Rv0366c Rv3169 (family_assigned) — hypothetical protein Rv3169 Rv2574 (family_assigned) — SRPBCC family protein Rv2574 Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv3195 (requalified) — zinc-dependent metalloprotease Rv3195 mshD (requalified) — mycothiol synthase mshD ilvB2 (family_assigned) — thiamine pyrophosphate-binding protein ilvB2 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv0464c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv0464c icl1 (requalified) — isocitrate lyase icl1 Rv0466 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv0466 Rv2499c (family_assigned) — MaoC family dehydratase Rv2499c accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 Rv3075c (requalified) — CoA ester lyase Rv3075c scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB fum (requalified) — class II fumarate hydratase fum mez (requalified) — NAD-dependent malic enzyme mez pca (requalified) — pyruvate carboxylase pca Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c accA2 (family_assigned) — biotin carboxylase N-terminal domain-containing pr accA2 Rv0976c (family_assigned) — acyclic terpene utilization AtuA family protein Rv0976c fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadE12 (requalified) — acyl-CoA dehydrogenase fadE12 echA7 (family_assigned) — enoyl-CoA hydratase family protein echA7 accA3 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA3 scoA (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit A scoA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.