MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1126c · 46 genes shown · anchor ppdK · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1126c (family_assigned) — MarR family transcriptional regulator Rv1126c ppdK (requalified) — pyruvate%2C phosphate dikinase ppdK Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 Rv0219 (dark) — hypothetical protein Rv0219 Rv2047c (family_assigned) — sugar epimerase family protein Rv2047c Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1748 (dark) — hypothetical protein Rv1748 hsr1 (requalified) — hypothetical protein hsr1 Rv1128c (family_assigned) — hypothetical protein Rv1128c Rv3689 (requalified) — transmembrane protein Rv3689 Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c mez (requalified) — NAD-dependent malic enzyme mez eno (requalified) — phosphopyruvate hydratase eno pca (requalified) — pyruvate carboxylase pca Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsN2 (requalified) — 30S ribosomal protein S14 rpsN2 Rv0218 (requalified) — molybdopterin-dependent oxidoreductase Rv0218 lipC (requalified) — esterase LipC lipC Rv0541c (family_assigned) — integral membrane protein Rv0541c echA1 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA1 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 pks12 (requalified) — type I polyketide synthase pks12 Rv3033 (requalified) — DUF4333 domain-containing protein Rv3033 Rv2114 (dark) — hypothetical protein Rv2114 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv1005c (requalified) — para-aminobenzoate synthase component I Rv1005c trpE (requalified) — anthranilate synthase component I trpE mbtI (requalified) — salicylate synthase mbtI xerC (requalified) — tyrosine recombinase XerC xerC Rv0336 (family_assigned) — hypothetical protein Rv0336 Rv0515 (family_assigned) — hypothetical protein Rv0515 Rv3776 (family_assigned) — hypothetical protein Rv3776 Rv2100 (family_assigned) — hypothetical protein Rv2100

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.